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Selection is central to biological evolution, yet there has been no general experimental framework for quantifying selection in chemical systems before life. Here we demonstrate that selection in a prebiological chemical system can be…

Molecular Networks · Quantitative Biology 2025-12-23 Michael Jirasek , Abhishek Sharma , Mary Wong , Jennifer Munro , Leroy Cronin

The problem of defining and studying complexity of a time series has interested people for years. In the context of dynamical systems, Grassberger has suggested that a slow approach of the entropy to its extensive asymptotic limit is a sign…

Data Analysis, Statistics and Probability · Physics 2009-11-07 William Bialek , Ilya Nemenman , Naftali Tishby

Ring theory is one of the branches of the abstract algebra that has been broadly used in images. However, ring theory has not been very related with image segmentation. In this paper, we propose a new index of similarity among images using…

Computer Vision and Pattern Recognition · Computer Science 2014-11-25 Yasel Garcés , Esley Torres , Osvaldo Pereira , Roberto Rodríguez

The theory of associative $n$-categories has recently been proposed as a strictly associative and unital approach to higher category theory. As a foundation for a proof assistant, this is potentially attractive, since it has the potential…

Logic in Computer Science · Computer Science 2022-05-19 Lukas Heidemann , David Reutter , Jamie Vicary

A unified combinatorial definition of the information content and entropy of different types of patterns, compatible with the traditional concepts of information and entropy, going beyond the limitations of Shannon information interpretable…

Information Theory · Computer Science 2025-01-22 Zsolt Pocze

This article provides a completion to theories of information based on entropy, resolving a longstanding question in its axiomatization as proposed by Shannon and pursued by Jaynes. We show that Shannon's entropy function has a…

Information Theory · Computer Science 2015-04-14 Frank Lad , Giuseppe Sanfilippo , Gianna Agrò

This paper presents evidence for the idea that much of artificial intelligence, human perception and cognition, mainstream computing, and mathematics, may be understood as compression of information via the matching and unification of…

Artificial Intelligence · Computer Science 2015-07-14 J. Gerard Wolff

We present an algorithm to estimate the configurational entropy $S$ of a polymer. The algorithm uses the statistics of coincidences among random samples of configurations and is related to the catch-tag-release method for estimation of…

Biomolecules · Quantitative Biology 2015-03-27 Ilya Nemenman , Michael E. Wall , Charlie E. Strauss

In a genetic algorithm, fluctuations of the entropy of a genome over time are interpreted as fluctuations of the information that the genome's organism is storing about its environment, being this reflected in more complex organisms. The…

Computational Engineering, Finance, and Science · Computer Science 2010-11-04 Manuel Cebrian , Manuel Alfonseca , Alfonso Ortega

Calculating the Shannon entropy for symbolic sequences has been widely considered in many fields. For descriptive statistical problems such as estimating the N-gram entropy of English language text, a common approach is to use as much data…

Information Theory · Computer Science 2018-05-24 Andrew D. Back , Daniel Angus , Janet Wiles

In Part I of this series, we established a rigorous mathematical isomorphism between ant colony decision-making and random forest learning, demonstrating that variance reduction through decorrelation is a universal principle shared by…

Machine Learning · Statistics 2026-04-02 Ernest Fokoué , Gregory Babbitt , Yuval Levental

We introduce a definition of algorithmic symmetry able to capture essential aspects of geometric symmetry. We review, study and apply a method for approximating the algorithmic complexity (also known as Kolmogorov-Chaitin complexity) of…

Computational Complexity · Computer Science 2018-03-07 Hector Zenil , Narsis A. Kiani , Jesper Tegnér

Abstraction plays a key role in concept learning and knowledge discovery; this paper is concerned with computational abstraction. In particular, we study the nature of abstraction through a group-theoretic approach, formalizing it as…

Machine Learning · Computer Science 2019-07-23 Haizi Yu , Igor Mineyev , Lav R. Varshney

In the past over two decades, very fruitful results have been obtained in information theory in the study of the Shannon entropy. This study has led to the discovery of a new class of constraints on the Shannon entropy called…

Information Theory · Computer Science 2025-03-07 Raymond W. Yeung

Rank/Select dictionaries are data structures for an ordered set $S \subset \{0,1,...,n-1\}$ to compute $\rank(x,S)$ (the number of elements in $S$ which are no greater than $x$), and $\select(i,S)$ (the $i$-th smallest element in $S$),…

Data Structures and Algorithms · Computer Science 2007-05-23 Daisuke Okanohara , Kunihiko Sadakane

Compressed Counting (CC)} was recently proposed for approximating the $\alpha$th frequency moments of data streams, for $0<\alpha \leq 2$. Under the relaxed strict-Turnstile model, CC dramatically improves the standard algorithm based on…

Data Structures and Algorithms · Computer Science 2008-08-21 Ping Li

Graph compression is a data analysis technique that consists in the replacement of parts of a graph by more general structural patterns in order to reduce its description length. It notably provides interesting exploration tools for the…

Data Structures and Algorithms · Computer Science 2018-07-19 Robin Lamarche-Perrin

In this paper, I expand Shannon's definition of entropy into a new form of entropy that allows integration of information from different random events. Shannon's notion of entropy is a special case of my more general definition of entropy.…

Machine Learning · Computer Science 2008-11-04 Stefan Jaeger

Entropies must correspond to mean values for them to be measurable. The Shannon entropy corresponds to the weighted arithmetic mean, whereas the Renyi entropy corresponds to the exponential mean. These means refer to code lengths, which are…

Statistical Mechanics · Physics 2011-10-25 B. H. Lavenda

The Poisson-sampling technique eliminates dependencies among symbol appearances in a random sequence. It has been used to simplify the analysis and strengthen the performance guarantees of randomized algorithms. Applying this method to…

Information Theory · Computer Science 2014-05-30 Jayadev Acharya , Ashkan Jafarpour , Alon Orlitsky , Ananda Theertha Suresh