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We propose STRuCT-LLM, a unified framework for training large language models (LLMs) to perform structured reasoning over both relational and graph-structured data. Our approach jointly optimizes Text-to-SQL and Text-to-Cypher tasks using…

Computation and Language · Computer Science 2025-06-30 Josefa Lia Stoisser , Marc Boubnovski Martell , Lawrence Phillips , Casper Hansen , Julien Fauqueur

Understanding large-scale, complex software systems is a major challenge for developers, who spend a significant portion of their time on program comprehension. Traditional tools such as static visualizations and reverse engineering…

Software Engineering · Computer Science 2025-08-11 Yoseph Berhanu Alebachew

Automated program repair (APR) struggles to scale from isolated functions to full repositories, as it demands a global, task-aware understanding to locate necessary changes. Current methods, limited by context and reliant on shallow…

Software Engineering · Computer Science 2026-03-03 Zhongqiang Pan , Chuanyi Li , Wenkang Zhong , Yi Feng , Bin Luo , Vincent Ng

The understanding of large-scale scientific software poses significant challenges due to its diverse codebase, extensive code length, and target computing architectures. The emergence of generative AI, specifically large language models…

Software Engineering · Computer Science 2024-03-19 Kareem Shaik , Dali Wang , Weijian Zheng , Qinglei Cao , Heng Fan , Peter Schwartz , Yunhe Feng

Large language models (LLMs) have gained significant attention in various fields but prone to hallucination, especially in knowledge-intensive (KI) tasks. To address this, retrieval-augmented generation (RAG) has emerged as a popular…

Computation and Language · Computer Science 2024-04-23 Xiaoxi Li , Zhicheng Dou , Yujia Zhou , Fangchao Liu

Retrieval-augmented generation (RAG) has improved large language models (LLMs) by using knowledge retrieval to overcome knowledge deficiencies. However, current RAG methods often fall short of ensuring the depth and completeness of…

Computation and Language · Computer Science 2025-02-11 Shengjie Ma , Chengjin Xu , Xuhui Jiang , Muzhi Li , Huaren Qu , Cehao Yang , Jiaxin Mao , Jian Guo

Large language models (LLMs) struggle with the factual error during inference due to the lack of sufficient training data and the most updated knowledge, leading to the hallucination problem. Retrieval-Augmented Generation (RAG) has gained…

Information Retrieval · Computer Science 2026-01-22 Zulun Zhu , Tiancheng Huang , Kai Wang , Junda Ye , Xinghe Chen , Siqiang Luo

Knowledge graphs and large language models (LLMs) are key tools for biomedical knowledge integration and reasoning, facilitating structured organization of scientific articles and discovery of complex semantic relationships. However,…

Computation and Language · Computer Science 2025-04-01 Yichun Feng , Jiawei Wang , Ruikun He , Lu Zhou , Yixue Li

Large Language Models (LLMs) excel at language understanding but remain limited in knowledge-intensive domains due to hallucinations, outdated information, and limited explainability. Text-based retrieval-augmented generation (RAG) helps…

Computation and Language · Computer Science 2026-02-09 Larissa Pusch , Alexandre Courtiol , Tim Conrad

Code completion (CC) is a task frequently used by developers when working in collaboration with LLM-based programming assistants. Despite the increased performance of LLMs on public benchmarks, out of the box LLMs still have a hard time…

Software Engineering · Computer Science 2026-02-06 Ulrich Finkler , Irene Manotas , Wei Zhang , Geert Janssen , Octavian Popescu , Shyam Ramji

Code search, framed as information retrieval (IR), underpins modern software engineering and increasingly powers retrieval-augmented generation (RAG), improving code discovery, reuse, and the reliability of LLM-based coding. Yet existing…

Software Engineering · Computer Science 2026-04-20 Jiahui Geng , Qing Li , Fengyu Cai , Fakhri Karray

Large language models (LLMs) continue to struggle with knowledge-intensive questions that require up-to-date information and multi-hop reasoning. Augmenting LLMs with hybrid external knowledge, such as unstructured text and structured…

Machine Learning · Computer Science 2026-02-12 Junhong Lin , Bing Zhang , Song Wang , Ziyan Liu , Dan Gutfreund , Julian Shun , Yada Zhu

Recently, Retrieval-Augmented Generation (RAG) has achieved remarkable success in addressing the challenges of Large Language Models (LLMs) without necessitating retraining. By referencing an external knowledge base, RAG refines LLM…

Artificial Intelligence · Computer Science 2024-09-11 Boci Peng , Yun Zhu , Yongchao Liu , Xiaohe Bo , Haizhou Shi , Chuntao Hong , Yan Zhang , Siliang Tang

Large Language Models (LLMs) demonstrate strong reasoning abilities but face limitations such as hallucinations and outdated knowledge. Knowledge Graph (KG)-based Retrieval-Augmented Generation (RAG) addresses these issues by grounding LLM…

Computation and Language · Computer Science 2025-03-04 Mufei Li , Siqi Miao , Pan Li

This paper presents a multi-stage reranking system for repository-level code search, which leverages the vastly available commit histories of large open-source repositories to aid in bug fixing. We define the task of repository-level code…

Information Retrieval · Computer Science 2025-02-12 Siddharth Gandhi , Luyu Gao , Jamie Callan

Large Language Models (LLMs) excel in data synthesis but can be inaccurate in domain-specific tasks, which retrieval-augmented generation (RAG) systems address by leveraging user-provided data. However, RAGs require optimization in both…

Computation and Language · Computer Science 2024-11-05 Kazi Ahmed Asif Fuad , Lizhong Chen

Repository-level code completion is challenging as it involves complicated contexts from multiple files in the repository. To date, researchers have proposed two technical categories to enhance LLM-based repository-level code completion,…

Software Engineering · Computer Science 2024-06-17 Junwei Liu , Yixuan Chen , Mingwei Liu , Xin Peng , Yiling Lou

Understanding and navigating large-scale codebases remains a significant challenge in software engineering. Existing methods often treat code as flat text or focus primarily on local structural relationships, limiting their ability to…

Software Engineering · Computer Science 2025-04-15 David Sounthiraraj , Jared Hancock , Yassin Kortam , Ashok Javvaji , Prabhat Singh , Shaila Shankar

Tool planning with large language models (LLMs), referring to selecting, organizing, and preparing the tools necessary to complete a user request, bridges the gap between natural language understanding and task execution. However, current…

Artificial Intelligence · Computer Science 2025-08-19 Wenjie Chen , Wenbin Li , Di Yao , Xuying Meng , Chang Gong , Jingping Bi

This study applies Large Language Models (LLMs) to two foundational Electronic Health Record (EHR) data science tasks: structured data querying (using programmatic languages, Python/Pandas) and information extraction from unstructured…

Computation and Language · Computer Science 2026-01-29 Juan Jose Rubio Jan , Jack Wu , Julia Ive