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Self-supervised learning (SSL) has achieved remarkable performance in various medical imaging tasks by dint of priors from massive unlabelled data. However, regarding a specific downstream task, there is still a lack of an instruction book…

Computer Vision and Pattern Recognition · Computer Science 2023-04-18 Chuyan Zhang , Yun Gu

Although supervised learning has enabled high performance for image segmentation, it requires a large amount of labeled training data, which can be difficult to obtain in the medical imaging field. Self-supervised learning (SSL) methods…

Multiple Instance Learning (MIL) has emerged as the best solution for Whole Slide Image (WSI) classification. It consists of dividing each slide into patches, which are treated as a bag of instances labeled with a global label. MIL includes…

Computer Vision and Pattern Recognition · Computer Science 2025-05-05 Ali Mammadov , Loic Le Folgoc , Julien Adam , Anne Buronfosse , Gilles Hayem , Guillaume Hocquet , Pietro Gori

Is self-supervised deep learning (DL) for medical image analysis already a serious alternative to the de facto standard of end-to-end trained supervised DL? We tackle this question for medical image classification, with a particular focus…

Computer Vision and Pattern Recognition · Computer Science 2023-09-08 Maximilian Nielsen , Laura Wenderoth , Thilo Sentker , René Werner

Self-supervised learning (SSL) has led to important breakthroughs in computer vision by allowing learning from large amounts of unlabeled data. As such, it might have a pivotal role to play in biomedicine where annotating data requires a…

Computer Vision and Pattern Recognition · Computer Science 2024-03-14 Roy Hirsch , Mathilde Caron , Regev Cohen , Amir Livne , Ron Shapiro , Tomer Golany , Roman Goldenberg , Daniel Freedman , Ehud Rivlin

Label scarcity has been a long-standing issue for biomedical image segmentation, due to high annotation costs and professional requirements. Recently, active learning (AL) strategies strive to reduce annotation costs by querying a small…

Image and Video Processing · Electrical Eng. & Systems 2022-11-02 Ziyuan Zhao , Wenjing Lu , Zeng Zeng , Kaixin Xu , Bharadwaj Veeravalli , Cuntai Guan

Contrastive, self-supervised learning (SSL) is used to train a model that predicts cancer type from miRNA, mRNA or RPPA expression data. This model, a pretrained FT-Transformer, is shown to outperform XGBoost and CatBoost, standard…

Machine Learning · Computer Science 2023-11-17 Christian John Hurry , Emma Slade

Deep learning technologies have already demonstrated a high potential to build diagnosis support systems from medical imaging data, such as Chest X-Ray images. However, the shortage of labeled data in the medical field represents one key…

Image and Video Processing · Electrical Eng. & Systems 2023-01-26 Iván de Andrés Tamé , Kirill Sirotkin , Pablo Carballeira , Marcos Escudero-Viñolo

We have gained access to vast amounts of multi-omics data thanks to Next Generation Sequencing. However, it is challenging to analyse this data due to its high dimensionality and much of it not being annotated. Lack of annotated data is a…

Machine Learning · Computer Science 2022-10-04 Sayed Hashim , Karthik Nandakumar , Mohammad Yaqub

Computer-aided diagnosis via deep learning relies on large-scale annotated data sets, which can be costly when involving expert knowledge. Semi-supervised learning (SSL) mitigates this challenge by leveraging unlabeled data. One effective…

Machine Learning · Computer Science 2020-05-25 Prashnna Kumar Gyawali , Sandesh Ghimire , Pradeep Bajracharya , Zhiyuan Li , Linwei Wang

Masked Image Modelling (MIM) has been shown to be an efficient self-supervised learning (SSL) pre-training paradigm when paired with transformer architectures and in the presence of a large amount of unlabelled natural images. The…

Computer Vision and Pattern Recognition · Computer Science 2023-01-02 Alvaro Fernandez-Quilez , Christoffer Gabrielsen Andersen , Trygve Eftestøl , Svein Reidar Kjosavik , Ketil Oppedal

Multiple instance learning (MIL) problem is currently solved from either bag-classification or instance-classification perspective, both of which ignore important information contained in some instances and result in limited performance.…

Computer Vision and Pattern Recognition · Computer Science 2024-08-12 Yingfan Ma , Xiaoyuan Luo , Mingzhi Yuan , Xinrong Chen , Manning Wang

Deep learning has proven to be a very effective approach for Hyperspectral Image (HSI) classification. However, deep neural networks require large annotated datasets to generalize well. This limits the applicability of deep learning for HSI…

Computer Vision and Pattern Recognition · Computer Science 2022-06-27 Nassim Ait Ali Braham , Lichao Mou , Jocelyn Chanussot , Julien Mairal , Xiao Xiang Zhu

Self-Supervised Learning (SSL) presents an exciting opportunity to unlock the potential of vast, untapped clinical datasets, for various downstream applications that suffer from the scarcity of labeled data. While SSL has revolutionized…

Computer Vision and Pattern Recognition · Computer Science 2025-04-07 Tassilo Wald , Constantin Ulrich , Stanislav Lukyanenko , Andrei Goncharov , Alberto Paderno , Maximilian Miller , Leander Maerkisch , Paul F. Jäger , Klaus Maier-Hein

Emotion recognition models using audio input data can enable the development of interactive systems with applications in mental healthcare, marketing, gaming, and social media analysis. While the field of affective computing using audio…

Sound · Computer Science 2023-07-25 Peranut Nimitsurachat , Peter Washington

Two problems often plague medical imaging analysis: 1) Non-availability of large quantities of labeled training data, and 2) Dealing with imbalanced data, i.e., abundant data are available for frequent classes, whereas data are highly…

Computer Vision and Pattern Recognition · Computer Science 2026-04-03 Yash Kumar Sharma , Charan Ramtej Kodi , Vineet Padmanabhan

The integration of Artificial Intelligence (AI) into clinical research has great potential to reveal patterns that are difficult for humans to detect, creating impactful connections between inputs and clinical outcomes. However, these…

While optical microscopy inspection of blood films and bone marrow aspirates by a hematologist is a crucial step in establishing diagnosis of acute leukemia, especially in low-resource settings where other diagnostic modalities might not be…

Semi-Supervised Learning (SSL) is a framework that utilizes both labeled and unlabeled data to enhance model performance. Conventional SSL methods operate under the assumption that labeled and unlabeled data share the same label space.…

Computer Vision and Pattern Recognition · Computer Science 2023-11-16 Noam Fluss , Guy Hacohen , Daphna Weinshall

Self-supervised learning (SSL) has recently achieved promising performance for 3D medical image analysis tasks. Most current methods follow existing SSL paradigm originally designed for photographic or natural images, which cannot…

Computer Vision and Pattern Recognition · Computer Science 2023-08-21 Yankai Jiang , Mingze Sun , Heng Guo , Xiaoyu Bai , Ke Yan , Le Lu , Minfeng Xu