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Related papers: Advancing Chinese biomedical text mining with comm…

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The amount of text that is generated every day is increasing dramatically. This tremendous volume of mostly unstructured text cannot be simply processed and perceived by computers. Therefore, efficient and effective techniques and…

Computation and Language · Computer Science 2017-07-31 Mehdi Allahyari , Seyedamin Pouriyeh , Mehdi Assefi , Saied Safaei , Elizabeth D. Trippe , Juan B. Gutierrez , Krys Kochut

While the capabilities of Large Language Models (LLMs) have been studied in both Simplified and Traditional Chinese, it is yet unclear whether LLMs exhibit differential performance when prompted in these two variants of written Chinese.…

Computation and Language · Computer Science 2025-05-29 Hanjia Lyu , Jiebo Luo , Jian Kang , Allison Koenecke

Ancient Chinese text processing presents unique challenges for large language models (LLMs) due to its distinct linguistic features, complex structural constraints, and rich cultural context. While existing benchmarks have primarily focused…

Computation and Language · Computer Science 2025-03-21 Shangqing Zhao , Yuhao Zhou , Yupei Ren , Zhe Chen , Chenghao Jia , Fang Zhe , Zhaogaung Long , Shu Liu , Man Lan

Biomedical language understanding benchmarks are the driving forces for artificial intelligence applications with large language model (LLM) back-ends. However, most current benchmarks: (a) are limited to English which makes it challenging…

Computation and Language · Computer Science 2023-10-24 Wei Zhu , Xiaoling Wang , Huanran Zheng , Mosha Chen , Buzhou Tang

Objective: Text mining of clinical notes embedded in electronic medical records is increasingly used to extract patient characteristics otherwise not or only partly available, to assess their association with relevant health outcomes. As…

Computation and Language · Computer Science 2023-01-18 Madhumita Sushil , Atul J. Butte , Ewoud Schuit , Maarten van Smeden , Artuur M. Leeuwenberg

Recently, Large Language Models (LLM) have demonstrated impressive capability to solve a wide range of tasks. However, despite their success across various tasks, no prior work has investigated their capability in the biomedical domain yet.…

Computation and Language · Computer Science 2024-02-21 Israt Jahan , Md Tahmid Rahman Laskar , Chun Peng , Jimmy Huang

Text-to-Table aims to generate structured tables to convey the key information from unstructured documents. Existing text-to-table datasets are typically oriented English, limiting the research in non-English languages. Meanwhile, the…

Computation and Language · Computer Science 2024-05-21 Haoxiang Shi , Jiaan Wang , Jiarong Xu , Cen Wang , Tetsuya Sakai

The advancement of large language models (LLMs) has led to a greater challenge of having a rigorous and systematic evaluation of complex tasks performed, especially in enterprise applications. Therefore, LLMs need to be able to benchmark…

Computation and Language · Computer Science 2024-10-18 Bing Zhang , Mikio Takeuchi , Ryo Kawahara , Shubhi Asthana , Md. Maruf Hossain , Guang-Jie Ren , Kate Soule , Yada Zhu

As large language models (LLMs) are increasingly applied to various NLP tasks, their inherent biases are gradually disclosed. Therefore, measuring biases in LLMs is crucial to mitigate its ethical risks. However, most existing bias…

Computation and Language · Computer Science 2025-08-08 Tian Lan , Xiangdong Su , Xu Liu , Ruirui Wang , Ke Chang , Jiang Li , Guanglai Gao

The flourishing blossom of deep learning has witnessed the rapid development of text recognition in recent years. However, the existing text recognition methods are mainly proposed for English texts. As another widely-spoken language,…

Computer Vision and Pattern Recognition · Computer Science 2022-11-28 Haiyang Yu , Jingye Chen , Bin Li , Jianqi Ma , Mengnan Guan , Xixi Xu , Xiaocong Wang , Shaobo Qu , Xiangyang Xue

Keeping track of scientific challenges, advances and emerging directions is a fundamental part of research. However, researchers face a flood of papers that hinders discovery of important knowledge. In biomedicine, this directly impacts…

Disease name recognition and normalization, which is generally called biomedical entity linking, is a fundamental process in biomedical text mining. Recently, neural joint learning of both tasks has been proposed to utilize the mutual…

Computation and Language · Computer Science 2021-04-22 Shogo Ujiie , Hayate Iso , Shuntaro Yada , Shoko Wakamiya , Eiji Aramaki

This is an overview of the thirteenth edition of the BioASQ challenge in the context of the Conference and Labs of the Evaluation Forum (CLEF) 2025. BioASQ is a series of international challenges promoting advances in large-scale biomedical…

The recently unprecedented advancements in Large Language Models (LLMs) have propelled the medical community by establishing advanced medical-domain models. However, due to the limited collection of medical datasets, there are only a few…

Computation and Language · Computer Science 2024-06-10 Ping Yu , Kaitao Song , Fengchen He , Ming Chen , Jianfeng Lu

Multi-modal data abounds in biomedicine, such as radiology images and reports. Interpreting this data at scale is essential for improving clinical care and accelerating clinical research. Biomedical text with its complex semantics poses…

Clinical Named Entity Recognition (CNER) aims to identify and classify clinical terms such as diseases, symptoms, treatments, exams, and body parts in electronic health records, which is a fundamental and crucial task for clinical and…

Computation and Language · Computer Science 2018-04-16 Qi Wang , Yuhang Xia , Yangming Zhou , Tong Ruan , Daqi Gao , Ping He

This paper describes the results of SemEval 2023 task 7 -- Multi-Evidence Natural Language Inference for Clinical Trial Data (NLI4CT) -- consisting of 2 tasks, a Natural Language Inference (NLI) task, and an evidence selection task on…

Computation and Language · Computer Science 2023-05-12 Maël Jullien , Marco Valentino , Hannah Frost , Paul O'Regan , Donal Landers , André Freitas

The exponential growth of biomedical texts such as biomedical literature and electronic health records (EHRs), poses a significant challenge for clinicians and researchers to access clinical information efficiently. To tackle this…

Computation and Language · Computer Science 2023-07-17 Qianqian Xie , Zheheng Luo , Benyou Wang , Sophia Ananiadou

Recent advancements in large language models (LLMs) have transformed the field of question answering (QA). However, evaluating LLMs in the medical field is challenging due to the lack of standardized and comprehensive datasets. To address…

Computation and Language · Computer Science 2023-10-24 Junling Liu , Peilin Zhou , Yining Hua , Dading Chong , Zhongyu Tian , Andrew Liu , Helin Wang , Chenyu You , Zhenhua Guo , Lei Zhu , Michael Lingzhi Li

Clinical text structuring is a critical and fundamental task for clinical research. Traditional methods such as taskspecific end-to-end models and pipeline models usually suffer from the lack of dataset and error propagation. In this paper,…

Computation and Language · Computer Science 2019-10-23 Jiahui Qiu , Yangming Zhou , Zhiyuan Ma , Tong Ruan , Jinlin Liu , Jing Sun