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\underline{Context:} Logging is a fundamental yet complex practice in software engineering, essential for monitoring, debugging, and auditing software systems. With the increasing integration of machine learning (ML) components into…

Software Engineering · Computer Science 2026-01-12 Patrick Loic Foalem , Leuson Da Silva , Foutse Khomh , Ettore Merlo , Heng Li

Refactorings are transformations to improve the code design without changing overall functionality and observable behavior. During the refactoring process of smelly test code, practitioners may struggle to identify refactoring candidates…

Software Engineering · Computer Science 2023-05-08 Luana Martins , Denivan Campos , Railana Santana , Joselito Mota Junior , Heitor Costa , Ivan Machado

Community smells are negative patterns in software development teams' interactions that impede their ability to successfully create software. Examples are team members working in isolation, lack of communication and collaboration across…

Machine learning (ML) has rapidly grown in popularity, becoming vital to many industries. Currently, the research on code smells in ML applications lacks tools and studies that address the identification and validity of ML-specific code…

Software Engineering · Computer Science 2025-08-05 Peter Hamfelt , Ricardo Britto , Lincoln Rocha , Camilo Almendra

Code smells signal violations of design principles that degrade the internal quality of evolving software systems. Although many tools detect such anomalies using static metrics, they often ignore the development context in which smells…

Software Engineering · Computer Science 2026-05-21 Matheus dos Santos Viegas , Adrian Gabriel Keller dos Santos , Kleinner Farias , Robson Keemps da Silva

Enhancing sampling and analyzing simulations are central issues in molecular simulation. Recently, we introduced PLUMED, an open-source plug-in that provides some of the most popular molecular dynamics (MD) codes with implementations of a…

Computational Physics · Physics 2014-10-07 Gareth A. Tribello , Massimiliano Bonomi , Davide Branduardi , Carlo Camilloni , Giovanni Bussi

Large Language Models (LLMs) have showcased remarkable capabilities surpassing conventional NLP challenges, creating opportunities for use in production use cases. Towards this goal, there is a notable shift to building compound AI systems,…

Context. The adoption of Machine Learning (ML)--enabled systems is steadily increasing. Nevertheless, there is a shortage of ML-specific quality assurance approaches, possibly because of the limited knowledge of how quality-related concerns…

Software Engineering · Computer Science 2024-03-14 Gilberto Recupito , Giammaria Giordano , Filomena Ferrucci , Dario Di Nucci , Fabio Palomba

Code smells are symptoms of potential code quality problems that may affect software maintainability, thus increasing development costs and impacting software reliability. Large language models (LLMs) have shown remarkable capabilities for…

Software Engineering · Computer Science 2026-01-16 Saymon Souza , Amanda Santana , Eduardo Figueiredo , Igor Muzetti , João Eduardo Montandon , Lionel Briand

An established trend in software engineering insists on using components (sometimes also called services or packages) to encapsulate a set of related functionalities or data. By defining interfaces specifying what functionalities they…

Software Engineering · Computer Science 2015-07-29 Daniel Ricardo dos Santos , Silvio Ranise , Serena Elisa Ponta

Refactoring is one of the most important activities in software engineering which is used to improve the quality of a software system. With the advancement of deep learning techniques, researchers are attempting to apply deep learning…

Software Engineering · Computer Science 2024-05-01 Bridget Nyirongo , Yanjie Jiang , He Jiang , Hui Liu

Artificial Intelligence (AI) and Machine Learning (ML) are pervasive in the current computer science landscape. Yet, there still exists a lack of software engineering experience and best practices in this field. One such best practice,…

Software Engineering · Computer Science 2021-03-09 Bart van Oort , Luís Cruz , Maurício Aniche , Arie van Deursen

Code smells indicate software design problems that harm software quality. Data-intensive systems that frequently access databases often suffer from SQL code smells besides the traditional smells. While there have been extensive studies on…

Software Engineering · Computer Science 2022-01-10 Biruk Asmare Muse , Mohammad Masudur Rahman , Csaba Nagy , Anthony Cleve , Foutse Khomh , Giuliano Antoniol

Large Language Models (LLMs) are increasingly integrated into software systems for diverse purposes, due to their versatility, flexibility, and ability to simulate human reasoning to some extent. However, poor integration of LLM inference…

Software Engineering · Computer Science 2026-05-25 Zacharie Chenail-Larcher , Brahim Mahmoudi , Naouel Moha , Quentin Stiévenart , Florent Avellaneda

Software module clustering is an unsupervised learning method used to cluster software entities (e.g., classes, modules, or files) with similar features. The obtained clusters may be used to study, analyze, and understand the software…

Software Engineering · Computer Science 2020-12-03 Qusay I. Sarhan , Bestoun S. Ahmed , Miroslav Bures , Kamal Z. Zamli

Code Smell, similar to a bad smell, is a surface indication of something tainted but in terms of software writing practices. This metric is an indication of a deeper problem lies within the code and is associated with an issue which is…

Software Engineering · Computer Science 2021-08-11 Himanshu Gupta , Tanmay G. Kulkarni , Lov Kumar , Lalita Bhanu Murthy Neti , Aneesh Krishna

Refactoring is a critical task in software maintenance, and is usually performed to enforce better design and coding practices, while coping with design defects. The Extract Method refactoring is widely used for merging duplicate code…

Code smells are indicators of potential design flaws in source code and do not appear alone but in combination with other smells, creating complex interactions. While existing literature classifies these smell interactions into collocated,…

Software Engineering · Computer Science 2025-04-28 Ruchin Gupta , Sandeep Kumar Singh

Code smells represent sub-optimal implementation choices applied by developers when evolving software systems. The negative impact of code smells has been widely investigated in the past: besides developers' productivity and ability to…

Software Engineering · Computer Science 2019-05-28 Gemma Catolino , Fabio Palomba , Francesca Arcelli Fontana , Andrea De Lucia , Andy Zaidman , Filomena Ferrucci

Object-oriented code smells are well-known concepts in software engineering that refer to bad design and development practices commonly observed in software systems. With the emergence of mobile apps, new classes of code smells have been…

Software Engineering · Computer Science 2020-10-15 Sarra Habchi , Naouel Moha , Romain Rouvoy