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We propose a weighted common subgraph (WCS) matching algorithm to find the most similar subgraphs in two labeled weighted graphs. WCS matching, as a natural generalization of the equal-sized graph matching or subgraph matching, finds wide…

Data Structures and Algorithms · Computer Science 2014-11-05 Xu Yang , Hong Qiao , Zhi-Yong Liu

Given a graph $G$, a cost function on the non-edges of $G$, and an integer $d$, the problem of finding a cheapest globally rigid supergraph of $G$ in $\mathbb{R}^d$ is NP-hard for $d\geq 1$. For this problem, which is a common…

Combinatorics · Mathematics 2024-01-19 Tibor Jordán , Soma Villányi

We study Steiner Forest on $H$-subgraph-free graphs, that is, graphs that do not contain some fixed graph $H$ as a (not necessarily induced) subgraph. We are motivated by a recent framework that completely characterizes the complexity of…

Given a graph, we can form a spanning forest by first sorting the edges in some order, and then only keep edges incident to a vertex which is not incident to any previous edge. The resulting forest is dependent on the ordering of the edges,…

Combinatorics · Mathematics 2018-02-16 Steve Butler , Misa Hamanaka , Marie Hardt

An $H$-graph is one representable as the intersection graph of connected subgraphs of a suitable subdivision of a fixed graph $H$, introduced by Bir\'{o}, Hujter and Tuza (1992). An $H$-graph is proper if the representing subgraphs of $H$…

Data Structures and Algorithms · Computer Science 2022-03-24 Deniz Ağaoğlu Çağırıcı , Petr Hliněný

Finding dense subgraphs of a large network is a fundamental problem in graph mining that has been studied extensively both for its theoretical richness and its many practical applications over the last five decades. However, most existing…

Social and Information Networks · Computer Science 2023-10-10 Ali Behrouz , Farnoosh Hashemi

As two fundamental problems, graph cuts and graph matching have been investigated over decades, resulting in vast literature in these two topics respectively. However the way of jointly applying and solving graph cuts and matching receives…

Computer Vision and Pattern Recognition · Computer Science 2017-11-28 Tianshu Yu , Junchi Yan , Jieyi Zhao , Baoxin Li

The tree-cut width of a graph is a graph parameter defined by Wollan [J. Comb. Theory, Ser. B, 110:47-66, 2015] with the help of tree-cut decompositions. In certain cases, tree-cut width appears to be more adequate than treewidth as an…

Data Structures and Algorithms · Computer Science 2018-05-16 Eunjung Kim , Sang-il Oum , Christophe Paul , Ignasi Sau , Dimitrios M. Thilikos

Generalised hypertree width ($ghw$) is a hypergraph parameter that is central to the tractability of many prominent problems with natural hypergraph structure. Computing $ghw$ of a hypergraph is notoriously hard. The decision version of the…

Data Structures and Algorithms · Computer Science 2024-01-09 Matthias Lanzinger , Igor Razgon

Given an undirected graph $G(V, E)$, it is well known that partitioning a graph $G$ into $q$ connected subgraphs of equal or specificed sizes is in general NP-hard problem. On the other hand, it has been shown that the q-partition problem…

Data Structures and Algorithms · Computer Science 2018-10-30 Ngoc-Tu Nguyen , Zhi-Li Zhang

The graph retrieval problem is to search in a large corpus of graphs for ones that are most similar to a query graph. A common consideration for scoring similarity is the maximum common subgraph (MCS) between the query and corpus graphs,…

Machine Learning · Computer Science 2022-10-21 Indradyumna Roy , Soumen Chakrabarti , Abir De

In this paper, we study the $k$-forest problem in the model of resource augmentation. In the $k$-forest problem, given an edge-weighted graph $G(V,E)$, a parameter $k$, and a set of $m$ demand pairs $\subseteq V \times V$, the objective is…

Data Structures and Algorithms · Computer Science 2016-11-23 Eric Angel , Nguyen Kim Thang , Shikha Singh

Graph connectivity and network design problems are among the most fundamental problems in combinatorial optimization. The minimum spanning tree problem, the two edge-connected spanning subgraph problem (2-ECSS) and the tree augmentation…

Data Structures and Algorithms · Computer Science 2020-01-14 David Adjiashvili , Felix Hommelsheim , Moritz Mühlenthaler

An {\it overlap representation} of a graph $G$ assigns sets to vertices so that vertices are adjacent if and only if their assigned sets intersect with neither containing the other. The {\it overlap number} $\ol(G)$ (introduced by Rosgen)…

We give a 2-approximation algorithm for the Maximum Agreement Forest problem on two rooted binary trees. This NP-hard problem has been studied extensively in the past two decades, since it can be used to compute the Subtree…

Data Structures and Algorithms · Computer Science 2016-04-29 Frans Schalekamp , Anke van Zuylen , Suzanne van der Ster

We present a general method of designing fast approximation algorithms for cut-based minimization problems in undirected graphs. In particular, we develop a technique that given any such problem that can be approximated quickly on trees,…

Data Structures and Algorithms · Computer Science 2010-11-09 Aleksander Madry

In the Densest k-Subgraph problem, given a graph G and a parameter k, one needs to find a subgraph of G induced on k vertices that contains the largest number of edges. There is a significant gap between the best known upper and lower…

Data Structures and Algorithms · Computer Science 2010-01-19 Aditya Bhaskara , Moses Charikar , Eden Chlamtac , Uriel Feige , Aravindan Vijayaraghavan

In this work, we propose a novel approach for subgraph matching, the problem of finding a given query graph in a large source graph, based on the fused Gromov-Wasserstein distance. We formulate the subgraph matching problem as a partial…

Information Theory · Computer Science 2024-07-01 Wen-Xin Pan , Isabel Haasler , Pascal Frossard

Phylogenetic trees are leaf-labelled trees used to model the evolution of species. In practice it is not uncommon to obtain two topologically distinct trees for the same set of species, and this motivates the use of distance measures to…

Data Structures and Algorithms · Computer Science 2026-03-24 David Mestel , Steven Chaplick , Steven Kelk , Ruben Meuwese

In this note, we consider the problem of finding a step-by-step transformation between two longest increasing subsequences in a sequence, namely Longest Increasing Subsequence Reconfiguration. We give a polynomial-time algorithm for…

Data Structures and Algorithms · Computer Science 2023-10-03 Yuuki Aoike , Masashi Kiyomi , Yasuaki Kobayashi , Yota Otachi