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The maximum common subtree isomorphism problem asks for the largest possible isomorphism between subtrees of two given input trees. This problem is a natural restriction of the maximum common subgraph problem, which is ${\sf NP}$-hard in…

Data Structures and Algorithms · Computer Science 2016-08-23 Andre Droschinsky , Nils M. Kriege , Petra Mutzel

Graph isomorphism, subgraph isomorphism, and maximum common subgraphs are classical well-investigated objects. Their (parameterized) complexity and efficiently tractable cases have been studied. In the present paper, for a given set of…

Data Structures and Algorithms · Computer Science 2024-03-22 Dieter Rautenbach , Florian Werner

In this paper we study a natural generalization of both {\sc $k$-Path} and {\sc $k$-Tree} problems, namely, the {\sc Subgraph Isomorphism} problem. In the {\sc Subgraph Isomorphism} problem we are given two graphs $F$ and $G$ on $k$ and $n$…

Data Structures and Algorithms · Computer Science 2009-12-15 Fedor V. Fomin , Daniel Lokshtanov , Venkatesh Raman , B. V. Raghavendra Rao , Saket Saurabh

We introduce a graph partitioning problem motivated by computational topology and propose two algorithms that produce approximate solutions. Specifically, given a weighted, undirected graph $G$ and a positive integer $k$, we desire to find…

Combinatorics · Mathematics 2019-07-04 Abdel-Rahman Madkour , Phillip Nadolny , Matthew Wright

We consider the problem of finding the smallest graph that contains two input trees each with at most $n$ vertices preserving their distances. In other words, we look for an isometric-universal graph with the minimum number of vertices for…

Data Structures and Algorithms · Computer Science 2025-06-17 Edgar Baucher , François Dross , Cyril Gavoille

Graph isomorphism is a problem for which there is no known polynomial-time solution. Nevertheless, assessing (dis)similarity between two or more networks is a key task in many areas, such as image recognition, biology, chemistry, computer…

Computation · Statistics 2022-06-28 Pierre Miasnikof , Alexander Y. Shestopaloff , Cristián Bravo , Yuri Lawryshyn

Let $F(G)$ be the number of forests of a graph $G$. Similarly let $C(G)$ be the number of connected spanning subgraphs of a connected graph $G$. We bound $F(G)$ and $C(G)$ for regular graphs and for graphs with fixed average degree. Among…

Combinatorics · Mathematics 2021-08-03 Márton Borbényi , Péter Csikvári , Haoran Luo

We study the problem of efficiently finding large common induced subgraphs of two independent Erd\H{o}s--R\'enyi random graphs $G_1, G_2 \sim \mathbb{G}(n,1/2)$. Recently, Chatterjee and Diaconis showed that the largest common induced…

Data Structures and Algorithms · Computer Science 2026-05-06 David Gamarnik , Miklós Z. Rácz , Gabe Schoenbach

Cubicity of a graph $G$ is the smallest dimension $d$, for which $G$ is a unit disc graph in ${\mathbb{R}}^d$, under the $l^\infty$ metric, i.e. $G$ can be represented as an intersection graph of $d$-dimensional (axis-parallel) unit…

Discrete Mathematics · Computer Science 2014-02-26 Jasine Babu , Manu Basavaraju , L Sunil Chandran , Deepak Rajendraprasad , Naveen Sivadasan

The graph isomorphism problem is theoretically interesting and also has many practical applications. The best known classical algorithms for graph isomorphism all run in time super-polynomial in the size of the graph in the worst case. An…

Quantum Physics · Physics 2011-04-26 David Rosenbaum

Let H be a graph, and let C_H(G) be the number of (subgraph isomorphic) copies of H contained in a graph G. We investigate the fundamental problem of estimating C_H(G). Previous results cover only a few specific instances of this general…

Data Structures and Algorithms · Computer Science 2019-02-20 Martin Furer , Shiva Prasad Kasiviswanathan

The Maximum Agreement Forest (Maf) problem is a well-studied problem in evolutionary biology, which asks for a largest common subforest of a given collection of phylogenetic trees with identical leaf label-set. However, the previous work…

Data Structures and Algorithms · Computer Science 2014-11-04 Feng Shi , Jianer Chen , Qilong Feng , Xiaojun Ding , Jianxin Wang

For a graph $G$ define the parameters $\ell(G)$ and $L(G)$ as the minimum and maximum value of $\nu(G\backslash F)$, where $F$ is a maximum matching of $G$ and $\nu(G)$ is the matching number of $G$. In this paper, we show that there is a…

Combinatorics · Mathematics 2025-04-29 Vahan Mkrtchyan

Given two graphs $H$ and $G$, the Subgraph Isomorphism problem asks if $H$ is isomorphic to a subgraph of $G$. While NP-hard in general, algorithms exist for various parameterized versions of the problem: for example, the problem can be…

Data Structures and Algorithms · Computer Science 2013-08-27 Dániel Marx , Michał Pilipczuk

The relationship between two important problems in tree pattern matching, the largest common subtree and the smallest common supertree problems, is established by means of simple constructions, which allow one to obtain a largest common…

Data Structures and Algorithms · Computer Science 2007-05-23 Francesc Rossello , Gabriel Valiente

In this paper we propose and study a new complexity model for approximation algorithms. The main motivation are practical problems over large data sets that need to be solved many times for different scenarios, e.g., many multicast trees…

Data Structures and Algorithms · Computer Science 2010-06-18 Marek Cygan , Lukasz Kowalik , Marcin Mucha , Marcin Pilipczuk , Piotr Sankowski

We describe a polynomial-time algorithm which, given a graph $G$ with treewidth $t$, approximates the pathwidth of $G$ to within a ratio of $O(t\sqrt{\log t})$. This is the first algorithm to achieve an $f(t)$-approximation for some…

Data Structures and Algorithms · Computer Science 2023-03-13 Carla Groenland , Gwenaël Joret , Wojciech Nadara , Bartosz Walczak

In the Properly Colored Spanning Tree problem, we are given an edge-colored undirected graph and the goal is to find a properly colored spanning tree, i.e., a spanning tree in which any two adjacent edges have distinct colors. The problem…

Data Structures and Algorithms · Computer Science 2024-02-02 Yuhang Bai , Kristóf Bérczi , Gergely Csáji , Tamás Schwarcz

Constrained forest problems form a class of graph problems where specific connectivity requirements for certain cuts within the graph must be satisfied by selecting the minimum-cost set of edges. The prize-collecting version of these…

Data Structures and Algorithms · Computer Science 2025-04-23 Ali Ahmadi , Iman Gholami , MohammadTaghi Hajiaghayi , Peyman Jabbarzade , Mohammad Mahdavi

In recent years many algorithms have been developed for finding patterns in graphs and networks. A disadvantage of these algorithms is that they use subgraph isomorphism to determine the support of a graph pattern; subgraph isomorphism is a…

Data Structures and Algorithms · Computer Science 2015-03-19 Anton Dries , Siegfried Nijssen
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