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The globally distributed computing infrastructure required to cope with the multi-petabytes datasets produced by the Compact Muon Solenoid (CMS) experiment at the Large Hadron Collider (LHC) at CERN comprises several subsystems, such as…
In this article, we present a novel approach for block-structured adaptive mesh refinement (AMR) that is suitable for extreme-scale parallelism. All data structures are designed such that the size of the meta data in each distributed…
Stimela2 is a new-generation framework for developing data reduction workflows. It is designed for radio astronomy data but can be adapted for other data processing applications. Stimela2 aims at the middle ground between ease of…
Task-based programming models like OmpSs-2 and OpenMP provide a flexible data-flow execution model to exploit dynamic, irregular and nested parallelism. Providing an efficient implementation that scales well with small granularity tasks…
Scientific Workflow Management Systems (SWfMSs) such as Galaxy have become essential infrastructure in bioinformatics, supporting the design, execution, and sharing of complex multi-step analyses. Despite hosting hundreds of reusable…
Although Machine Learning model building has become increasingly accessible due to a plethora of tools, libraries and algorithms being available freely, easy operationalization of these models is still a problem. It requires considerable…
To address the ``reusability dilemma'' and structural hallucinations in enterprise Agentic AI,this paper proposes ReusStdFlow, a framework centered on a novel ``Extraction-Storage-Construction'' paradigm. The framework deconstructs…
In the upcoming upgrades for Run 3 and 4, the LHC will significantly increase Pb--Pb and pp interaction rates. This goes along with upgrades of all experiments, ALICE, ATLAS, CMS, and LHCb, related to both the detectors and the computing.…
Performance modeling of parallel applications on multicore processors remains a challenge in computational co-design due to multicore processors' complex design. Multicores include complex private and shared memory hierarchies. We present a…
The conventional model of resource allocation in HPC systems is static. Thus, a job cannot leverage newly available resources in the system or release underutilized resources during the execution. In this paper, we present Kub, a…
Cloud computing provides ubiquitous and on-demand access to vast reconfigurable resources that can meet any computational need. Many service models are available, but the Infrastructure as a Service (IaaS) model is particularly suited to…
Approximate Nearest Neighbor Search (ANNS) is a fundamental operation in vector databases, enabling efficient similarity search in high-dimensional spaces. While dense ANNS has been optimized using specialized hardware accelerators, sparse…
Quantum-based molecular dynamics (QMD) is a highly accurate and transferable method for material science simulations. However, the time scales and system sizes accessible to QMD are typically limited to picoseconds and a few hundred atoms.…
System-on-chip (SoC) has migrated from single core to manycore architectures to cope with the increasing complexity of real-life applications. Application task mapping has a significant impact on the efficiency of manycore system (MCS)…
Large-scale scientific collaborations like ATLAS, Belle II, CMS, DUNE, and others involve hundreds of research institutes and thousands of researchers spread across the globe. These experiments generate petabytes of data, with volumes soon…
During the ESCAPE project, a pilot analysis facility was developed with a bottom-up approach, in collaboration with all the project partners. As a result, the CERN Virtual Research Environment (VRE) initiative proposes a workspace that…
We present a versatile open-source framework designed to facilitate efficient, numerically-tailored Matrix-Matrix Multiplications (MMMs). The framework offers two primary contributions: first, a fine-tuned, automated pipeline for arithmetic…
Running scientific workflows on a supercomputer can be a daunting task for a scientific domain specialist. Workflow management solutions (WMS) are a standard method for reducing the complexity of application deployment on high performance…
COVID-19 global pandemic is an unprecedented health crisis. Since the outbreak, many researchers around the world have produced an extensive collection of literatures. For the research community and the general public to digest, it is…
Objective: To develop and evaluate a scalable methodology for harmonizing inconsistent units in large-scale clinical datasets, addressing a key barrier to data interoperability. Materials and Methods: We designed a novel unit harmonization…