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Neurons have the capability of transforming information from a digital signal at the dendrites of the presynaptic termi- nal to an analogous wave at the synaptic cleft and back to a digital pulse when they achieve the required voltage for…

Biological Physics · Physics 2018-10-19 Alexandra Pinto Castellanos

A profound challenge for A-Life is to construct agents whose behavior is 'life-like' in a deep way. We propose an architecture and approach to constructing networks driving artificial agents, using processes analogous to the processes that…

Neural and Evolutionary Computing · Computer Science 2022-02-01 Addison Wood , Jory Schossau , Nick Sabaj , Richard Liu , Mark Reimers

We give an explicit formula for the membrane potential of cells in terms of the intracellular and extracellular ionic concentrations, and derive equations for the ionic currents that flow through channels, exchangers and electrogenic pumps.…

Biological Physics · Physics 2007-05-23 L. P. Endresen , K. Hall , J. S. Hoye , J. Myrheim

This work proposes a two-dimensional electrophysiological model for describing neuronal responses to external electric stimuli under patch-clamped conditions. Our proposed model successfully captures the key features of the Hodgkin-Huxley…

Neurons and Cognition · Quantitative Biology 2023-12-13 Lízia Maria Gonçalves Branco , Rui Manuel Agostinho Dilão

Systems are typically made from simple components regardless of their complexity. While the function of each part is easily understood, higher order functions are emergent properties and are notoriously difficult to explain. In networked…

Artificial Intelligence · Computer Science 2018-01-18 Jory Schossau , Larissa Albantakis , Arend Hintze

Cells control fluid flows with a spatial and temporal precision that far exceeds the capabilities of current microfluidic technologies. Cells achieve this superior spatio-temporal control by harnessing dynamic networks of cytoskeleton and…

Soft Condensed Matter · Physics 2025-05-26 Fan Yang , Shichen Liu , Heun Jin Lee , Rob Phillips , Matt Thomson

Starting from the concept of binary interactions between pairs of particles, a kinetic framework for the description of the action potential dynamics on a neural network is proposed. It consists of two coupled levels: the description of a…

Biological Physics · Physics 2023-03-21 Martina Conte , Maria Groppi , Andrea Tosin

Experiments on single ionic channels have contributed to a large extent to our current view on the function of cell membrane. In these experiments the main observables are the physical quantities: ionic concentration, membrane electrostatic…

Biological Physics · Physics 2018-04-17 Laureano Ramírez-Piscina , José M. Sancho

Living systems are capable of locomotion, reconfiguration, and replication. To perform these tasks, cells spatiotemporally coordinate the interactions of force-generating, "active" molecules that create and manipulate non-equilibrium…

Soft Condensed Matter · Physics 2019-08-28 Tyler D. Ross , Heun Jin Lee , Zijie Qu , Rachel A. Banks , Rob Phillips , Matt Thomson

We study bosonic atoms with two internal states in artificial gauge potentials whose strengths are different for the two components. A series of topological phases for such systems is proposed using the composite fermion theory and the…

Quantum Gases · Physics 2016-08-03 Ying-Hai Wu , Tao Shi

The Hodgkin-Huxley model describes the conduction of the nervous impulse through the axon, whose membrane's electric response can be described employing multiple connected electric circuits containing capacitors, voltage sources, and…

Neurons and Cognition · Quantitative Biology 2021-12-13 Tasio Gonzalez-Raya , Enrique Solano , Mikel Sanz

Active materials are capable of converting free energy into mechanical work to produce autonomous motion, and exhibit striking collective dynamics that biology relies on for essential functions. Controlling those dynamics and transport in…

A central problem in systems biology is to identify parameter values such that a biological model satisfies some behavioral constraints (\eg, time series). In this paper we focus on parameter synthesis for hybrid (continuous/discrete)…

Logic in Computer Science · Computer Science 2014-09-11 Bing Liu , Soonho Kong , Sicun Gao , Paolo Zuliani , Edmund M. Clarke

This paper investigates the complex nonlinear dynamics of an optomechanical system featuring an optical cavity coupled to two mechanical resonators interconnected by a phase-dependent interaction. We specifically explore the role of this…

We analyse biased ensembles of trajectories for the random-field Ising model on a fully-connected lattice, which is described exactly by mean-field theory. By coupling the activity of the system to a dynamical biasing field, we find a range…

Statistical Mechanics · Physics 2021-10-27 Jules Guioth , Robert L. Jack

Preparing realistic atom-scale models of amorphous silicon (a-Si) is a decades-old condensed matter physics challenge. Herein, we combine the Activation Relaxation Technique nouveau (ARTn) to a Moment Tensor Potential (MTP) to generate…

Disordered Systems and Neural Networks · Physics 2025-03-25 Karim Zongo , Hao Sun , Claudiane Ouellet-Plamondon , Normand Mousseau , Laurent Karim Béland

Active systems across scales, ranging from molecular machines to human crowds, are usually modeled as assemblies of self-propelled particles driven by internally generated forces. However, these models often assume memoryless dynamics and…

Statistical Mechanics · Physics 2025-12-10 Marc Besse , Raphaël Voituriez

This paper develops a control-theoretic framework for analyzing agentic systems embedded within feedback control loops, where an AI agent may adapt controller parameters, select among control strategies, invoke external tools, reconfigure…

Systems and Control · Electrical Eng. & Systems 2026-03-26 Ali Eslami , Jiangbo Yu

Temporal action proposal generation is an essential and challenging task that aims at localizing temporal intervals containing human actions in untrimmed videos. Most of existing approaches are unable to follow the human cognitive process…

Computer Vision and Pattern Recognition · Computer Science 2022-03-18 Viet-Khoa Vo-Ho , Ngan Le , Kashu Yamazaki , Akihiro Sugimoto , Minh-Triet Tran

We show theoretically that a lattice of exciton-polaritons can behave as a life-like cellular automaton when simultaneously excited by a continuous wave coherent field and a time-periodic sequence of non-resonant pulses. This provides a…

Mesoscale and Nanoscale Physics · Physics 2021-07-27 R. Banerjee , T. C. H. Liew