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This article is devoted to the theoretical and numerical analysis of a network of excitatory and inhibitory neurons of Hodgkin-Huxley (HH) type, for which the topology is inspired by that of a single local layer of visual cortex V1. Our…

Neurons and Cognition · Quantitative Biology 2021-08-13 M. Maama , B. Ambrosio , M. A. Aziz-Alaoui , S. M. Mintchev

Spectral decomposition has been rarely used to investigate complex networks. In this work we apply this concept in order to define two types of link-directed attacks while quantifying their respective effects on the topology. Several other…

Physics and Society · Physics 2015-05-30 Gonzalo Travieso , Luciano da Fontoura Costa

Networks are a general language for representing relational information among objects. An effective way to model, reason about, and summarize networks, is to discover sets of nodes with common connectivity patterns. Such sets are commonly…

Social and Information Networks · Computer Science 2014-01-30 Jaewon Yang , Julian McAuley , Jure Leskovec

We provide the first classification of different types of Random Boolean Networks (RBNs). We study the differences of RBNs depending on the degree of synchronicity and determinism of their updating scheme. For doing so, we first define…

Computational Complexity · Computer Science 2007-05-23 Carlos Gershenson

Identification of vital nodes contributes to the research of network robustness and vulnerability. The most influential nodes are effective in maximizing the speed and accelerating the information propagation in complex networks.…

Discrete Mathematics · Computer Science 2025-09-16 Zeynep Nihan Berberler , Aysun Asena Kunt

Networks are ubiquitous in biology and computational approaches have been largely investigated for their inference. In particular, supervised machine learning methods can be used to complete a partially known network by integrating various…

Machine Learning · Computer Science 2014-04-25 Marie Schrynemackers , Louis Wehenkel , M. Madan Babu , Pierre Geurts

In this paper, we conduct theoretical analyses on inferring the structure of gene regulatory networks. Depending on the experimental method and data type, the inference problem is classified into 20 different scenarios. For each scenario,…

Molecular Networks · Quantitative Biology 2022-02-18 Yue Wang , Zikun Wang

Identifiability of linear dynamic networks requires the presence of a sufficient number of external excitation signals. The problem of allocating a minimal number of external signals for guaranteeing generic network identifiability has been…

Systems and Control · Electrical Eng. & Systems 2022-05-16 H. J. Dreef , S. Shi , X. Cheng , M. C. F. Donkers , P. M. J. Van den Hof

We partially determine grid homology (combinatorial knot Floer homology) of diagonal knots, which are conjectured to be equivalent to positive braid knots, by exploiting nice grid diagrams. Its next-to-top term detects the number of prime…

Geometric Topology · Mathematics 2025-07-18 Hajime Kubota

When inhibitory neurons constitute about 40% of neurons they could have an important antinociceptive role, as they would easily regulate the level of activity of other neurons. We consider a simple network of cortical spiking neurons with…

Neurons and Cognition · Quantitative Biology 2014-01-28 Fernando Montani , Emilia B. Deleglise , Osvaldo A. Rosso

We recall several known results about minimally 2-connected graphs, and show that they all follow from a decomposition theorem. Starting from an analogy with critically 2-connected graphs, we give structural characterizations of the classes…

Discrete Mathematics · Computer Science 2016-03-27 Pierre Aboulker , Marko Radovanović , Nicolas Trotignon , Kristina Vušković

Collective oscillations and their suppression by external stimulation are analyzed in a large-scale neural network consisting of two interacting populations of excitatory and inhibitory quadratic integrate-and-fire neurons. In the limit of…

Neurons and Cognition · Quantitative Biology 2021-07-14 Kestutis Pyragas , Augustinas P. Fedaravičius , Tatjana Pyragienė

Many complex systems present an intrinsic bipartite nature and are often described and modeled in terms of networks [1-5]. Examples include movies and actors [1, 2, 4], authors and scientific papers [6-9], email accounts and emails [10],…

Physics and Society · Physics 2014-03-31 Michele Tumminello , Salvatore Miccichè , Fabrizio Lillo , Jyrki Piilo , Rosario N. Mantegna

Neural Networks (NN) has been used in many areas with great success. When a NN's structure (Model) is given, during the training steps, the parameters of the model are determined using an appropriate criterion and an optimization algorithm…

Machine Learning · Computer Science 2024-08-15 Ali Mohammad-Djafari , Ning Chu , Li Wang , Caifang Cai , Liang Yu

In this work, we consider two types of adversarial attacks on a network of nodes seeking to reach consensus. The first type involves an adversary that is capable of breaking a specific number of links at each time instant. In the second…

Optimization and Control · Mathematics 2013-03-12 Ali Khanafer , Behrouz Touri , Tamer Başar

We consider the problem of estimating high-dimensional Gaussian graphical models corresponding to a single set of variables under several distinct conditions. This problem is motivated by the task of recovering transcriptional regulatory…

Machine Learning · Statistics 2014-01-24 Karthik Mohan , Palma London , Maryam Fazel , Daniela Witten , Su-In Lee

Degree assortativity refers to the increased or decreased probability of connecting two neurons based on their in- or out-degrees, relative to what would be expected by chance. We investigate the effects of such assortativity in a network…

Adaptation and Self-Organizing Systems · Physics 2020-04-02 Christian Blasche , Shawn Means , Carlo R. Laing

Starting from the fact that complete Accepting Hybrid Networks of Evolutionary Processors allow much communication between the nodes and are far from network structures used in practice, we propose in this paper three network topologies…

Computational Complexity · Computer Science 2010-08-11 Jürgen Dassow , Florin Manea

We conduct a systematic study of asynchronous models of distributed computing consisting of identical finite-state devices that cooperate in a network to decide if the network satisfies a given graph-theoretical property. Models discussed…

Formal Languages and Automata Theory · Computer Science 2020-07-08 Javier Esparza , Fabian Reiter

Identifying influential nodes in a network is a fundamental issue due to its wide applications, such as accelerating information diffusion or halting virus spreading. Many measures based on the network topology have emerged over the years…

Social and Information Networks · Computer Science 2022-12-26 Zakariya Ghalmane , Mohammed El Hassouni , Chantal Cherifi , Hocine Cherifi