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Species tree estimation is a complex problem, due to the fact that different parts of the genome can have different evolutionary histories than the genome itself. One of the causes for this discord is incomplete lineage sorting (also called…

Populations and Evolution · Quantitative Biology 2019-04-09 Erin Molloy , Tandy Warnow

Monitoring forest dynamics at an individual tree scale is essential for accurately assessing ecosystem responses to climate change, yet traditional methods relying on field-based forest inventories are labor-intensive and limited in spatial…

Computer Vision and Pattern Recognition · Computer Science 2025-03-20 Matthew J. Allen , Harry J. F. Owen , Stuart W. D. Grieve , Emily R. Lines

This work presents a probabilistic deep neural network that combines LiDAR point clouds and RGB camera images for robust, accurate 3D object detection. We explicitly model uncertainties in the classification and regression tasks, and…

Robotics · Computer Science 2020-02-04 Di Feng , Yifan Cao , Lars Rosenbaum , Fabian Timm , Klaus Dietmayer

Model performance is frequently reported only for the overall population under consideration. However, due to heterogeneity, overall performance measures often do not accurately represent model performance within specific subgroups. We…

Methodology · Statistics 2025-06-03 Ruotao Zhang , Constantine Gatsonis , Jon Steingrimsson

This paper presents an automated pipeline for detecting tree whorls in proximally laser scanning data using a pose-estimation deep learning model. Accurate whorl detection provides valuable insights into tree growth patterns, wood quality,…

Computer Vision and Pattern Recognition · Computer Science 2024-09-24 Stefano Puliti , Carolin Fischer , Rasmus Astrup

Contour trees describe the topology of level sets in scalar fields and are widely used in topological data analysis and visualization. A main challenge of utilizing contour trees for large-scale scientific data is their computation at scale…

Computational Geometry · Computer Science 2024-10-01 Mingzhe Li , Hamish Carr , Oliver Rübel , Bei Wang , Gunther H. Weber

Fine-scale forest monitoring is essential for understanding canopy structure and its dynamics, which are key indicators of carbon stocks, biodiversity, and forest health. Deep learning is particularly effective for this task, as it…

Computer Vision and Pattern Recognition · Computer Science 2026-05-28 Ekaterina Kalinicheva , Florian Helen , Stéphane Mermoz , Florian Mouret , Milena Planells

Crowd counting in single-view images has achieved outstanding performance on existing counting datasets. However, single-view counting is not applicable to large and wide scenes (e.g., public parks, long subway platforms, or event spaces)…

Computer Vision and Pattern Recognition · Computer Science 2022-05-03 Qi Zhang , Antoni B. Chan

LiDAR scanning for surveying applications acquire measurements over wide areas and long distances, which produces large-scale 3D point clouds with significant local density variations. While existing 3D semantic segmentation models conduct…

Computer Vision and Pattern Recognition · Computer Science 2023-07-06 Ryan Faulkner , Luke Haub , Simon Ratcliffe , Ian Reid , Tat-Jun Chin

Food resources face severe damages under extraordinary situations of catastrophes such as earthquakes, cyclones, and tsunamis. Under such scenarios, speedy assessment of food resources from agricultural land is critical as it supports aid…

Image and Video Processing · Electrical Eng. & Systems 2021-05-11 Muhammad Shakaib Iqbal , Hazrat Ali , Son N. Tran , Talha Iqbal

We seek to improve crowd counting as we perceive limits of currently prevalent density map estimation approach on both prediction accuracy and time efficiency. We leverage multilevel pixelation of density map as it helps improve SNR of…

Computer Vision and Pattern Recognition · Computer Science 2020-08-04 Zhuojun Chen , Junhao Cheng , Yuchen Yuan , Dongping Liao , Yizhou Li , Jiancheng Lv

Accurate forest canopy height estimation is essential for evaluating aboveground biomass and carbon stock dynamics, supporting ecosystem monitoring services like timber provisioning, climate change mitigation, and biodiversity conservation.…

Computer Vision and Pattern Recognition · Computer Science 2024-10-25 Jose B. Castro , Cheryl Rogers , Camile Sothe , Dominic Cyr , Alemu Gonsamo

This study demonstrates a method to locate an ideal perch location on a tree for vision-guided autonomous tree-perching drones. Various image processing algorithms, including those used for machine learning, image segmentation and binary…

Robotics · Computer Science 2026-05-18 Alex Dunnett , Leonie Bottomley , Mirko Kovac , Basaran Bahadir Kocer

The process of estimating and counting tree density using only a single aerial or satellite image is a difficult task in the fields of photogrammetry and remote sensing. However, it plays a crucial role in the management of forests. The…

Computer Vision and Pattern Recognition · Computer Science 2024-07-02 Hamed Amini Amirkolaee , Miaojing Shi , Lianghua He , Mark Mulligan

We propose a simple yet effective deep tree-structured fusion model based on feature aggregation for the deraining problem. We argue that by effectively aggregating features, a relatively simple network can still handle tough image…

Computer Vision and Pattern Recognition · Computer Science 2018-11-22 Xueyang Fu , Qi Qi , Yue Huang , Xinghao Ding , Feng Wu , John Paisley

Conservation and decision-making regarding forest resources necessitate regular forest inventory. Light detection and ranging (LiDAR) in laser scanning systems has gained significant attention over the past two decades as a remote and…

Image and Video Processing · Electrical Eng. & Systems 2025-07-14 Narges Takhtkeshha , Lauris Bocaux , Lassi Ruoppa , Fabio Remondino , Gottfried Mandlburger , Antero Kukko , Juha Hyyppä

Urban forests play a key role in enhancing environmental quality and supporting biodiversity in cities. Mapping and monitoring these green spaces are crucial for urban planning and conservation, yet accurately detecting trees is challenging…

Computer Vision and Pattern Recognition · Computer Science 2025-05-22 Alessandro dos Santos Ferreira , Ana Paula Marques Ramos , José Marcato Junior , Wesley Nunes Gonçalves

This paper investigates tree species classification using Sentinel-2 multispectral satellite image time-series. Despite their critical importance for many applications, such maps are often unavailable, outdated, or inaccurate for large…

Image and Video Processing · Electrical Eng. & Systems 2024-11-28 Florian Mouret , David Morin , Milena Planells , Cécile Vincent-Barbaroux

This paper shows the achievement of a sensing and navigation system of aerial robot for measuring location and size of trees in a forest environment autonomously. Although forestry is an important industry in Japan, the working population…

Robotics · Computer Science 2023-02-14 Tomoki Anzai , Moju Zhao , Fan Shi , Kei Okada , Masayuki Inaba

The accurate semantic segmentation of tree crowns within remotely sensed data is crucial for scientific endeavours such as forest management, biodiversity studies, and carbon sequestration quantification. However, precise segmentation…

Computer Vision and Pattern Recognition · Computer Science 2025-05-30 Georgios Voulgaris