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AI-driven discovery can greatly reduce design time and enhance new therapeutics' effectiveness. Models using simulators explore broad design spaces but risk violating implicit constraints due to a lack of experimental priors. For example,…

Deep learning has significantly advanced molecular modeling and design, enabling efficient understanding and discovery of novel molecules. In particular, large language models (LLMs) introduce a fresh research paradigm to tackle scientific…

Machine Learning · Computer Science 2025-01-06 Pengfei Liu , Jun Tao , Zhixiang Ren

Large language models (LLMs) have demonstrated broad utility across molecular domains, spanning drug discovery and materials design. Analyzing LLMs' latent representations is crucial for elucidating their underlying mechanisms, improving…

Machine Learning · Computer Science 2026-02-03 Zhuoran Li , Xu Sun , Wanyu Lin , Jiannong Cao

Foundation models have revolutionized natural language processing and artificial intelligence, significantly enhancing how machines comprehend and generate human languages. Inspired by the success of these foundation models, researchers…

Datasets play a central role in the training and evaluation of machine learning (ML) models. But they are also the root cause of many undesired model behaviors, such as biased predictions. To overcome this situation, the ML community is…

Machine Learning · Computer Science 2024-01-23 Joan Giner-Miguelez , Abel Gómez , Jordi Cabot

Large language models (LLMs) offer new opportunities for automated data extraction and property prediction across materials science, yet their use in superconductivity research remains limited. Here we construct a large experimental…

Materials Science · Physics 2025-12-12 Suman Itani , Yibo Zhang , Ranjit Itani , Jiadong Zang

Building effective machine learning (ML) workflows to address complex tasks is a primary focus of the Automatic ML (AutoML) community and a critical step toward achieving artificial general intelligence (AGI). Recently, the integration of…

Machine Learning · Computer Science 2024-12-30 Yang Gu , Hengyu You , Jian Cao , Muran Yu , Haoran Fan , Shiyou Qian

Molecular property prediction has gained significant attention due to its transformative potential in multiple scientific disciplines. Conventionally, a molecule graph can be represented either as a graph-structured data or a SMILES text.…

Machine Learning · Computer Science 2023-07-17 Chen Qian , Huayi Tang , Zhirui Yang , Hong Liang , Yong Liu

Predicting molecular properties is a critical component of drug discovery. Recent advances in deep learning, particularly Graph Neural Networks (GNNs), have enabled end-to-end learning from molecular structures, reducing reliance on manual…

Computation and Language · Computer Science 2025-09-26 Peng Zhou , Lai Hou Tim , Zhixiang Cheng , Kun Xie , Chaoyi Li , Wei Liu , Xiangxiang Zeng

This survey reviews works in which language models (LMs) are augmented with reasoning skills and the ability to use tools. The former is defined as decomposing a potentially complex task into simpler subtasks while the latter consists in…

Large Language Models (LLMs) stand at the forefront of a number of Natural Language Processing (NLP) tasks. Despite the widespread adoption of LLMs in NLP, much of their potential in broader fields remains largely unexplored, and…

Machine Learning · Computer Science 2024-03-11 Zhiqiang Zhong , Kuangyu Zhou , Davide Mottin

Code search is a task to find programming codes that semantically match the given natural language queries. Even though some of the existing datasets for this task are multilingual on the programming language side, their query data are only…

Computation and Language · Computer Science 2023-06-28 Ryo Sekizawa , Nan Duan , Shuai Lu , Hitomi Yanaka

Recent regulatory initiatives like the European AI Act and relevant voices in the Machine Learning (ML) community stress the need to describe datasets along several key dimensions for trustworthy AI, such as the provenance processes and…

Digital Libraries · Computer Science 2024-05-27 Joan Giner-Miguelez , Abel Gómez , Jordi Cabot

Language models are increasingly used not only as standalone predictors but also as components in larger inference systems, from test-time reasoning to multi-model collaboration. We study language model networks, where pre-trained language…

Artificial Intelligence · Computer Science 2026-05-14 Shiguang Wu , Yaqing Wang , Quanming Yao

Recent advances in foundation models present new opportunities for interpretable visual recognition -- one can first query Large Language Models (LLMs) to obtain a set of attributes that describe each class, then apply vision-language…

Computer Vision and Pattern Recognition · Computer Science 2023-08-08 An Yan , Yu Wang , Yiwu Zhong , Chengyu Dong , Zexue He , Yujie Lu , William Wang , Jingbo Shang , Julian McAuley

Audio-language models (ALMs) generate linguistic descriptions of sound-producing events and scenes. Advances in dataset creation and computational power have led to significant progress in this domain. This paper surveys 69 datasets used to…

Sound · Computer Science 2025-02-10 Gijs Wijngaard , Elia Formisano , Michele Esposito , Michel Dumontier

The advent of Large Language Models (LLMs) has significantly advanced the field of automated code generation. LLMs rely on large and diverse datasets to learn syntax, semantics, and usage patterns of programming languages. For low-resource…

Software Engineering · Computer Science 2025-02-03 Alessandro Giagnorio , Alberto Martin-Lopez , Gabriele Bavota

Language models (LMs) are no longer restricted to ML community, and instruction-tuned LMs have led to a rise in autonomous AI agents. As the accessibility of LMs grows, it is imperative that an understanding of their capabilities, intended…

Computation and Language · Computer Science 2023-09-25 Shruti Singh , Hitesh Lodwal , Husain Malwat , Rakesh Thakur , Mayank Singh

Large language models (LLMs) have demonstrated remarkable performance across a wide range of tasks and domains, with data playing a central role in enabling these advances. Despite this success, the preparation and effective utilization of…

Computation and Language · Computer Science 2026-03-17 Hao Liang , Zhengyang Zhao , Zhaoyang Han , Meiyi Qiang , Xiaochen Ma , Bohan Zeng , Qifeng Cai , Zhiyu Li , Linpeng Tang , Weinan E , Wentao Zhang