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Related papers: Lincoln's Annotated Spatio-Temporal Strawberry Dat…

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With the need to feed a growing world population, the efficiency of crop production is of paramount importance. To support breeding and field management, various characteristics of the plant phenotype need to be measured -- a time-consuming…

Semantic labeling of 3D point clouds is important for the derivation of 3D models from real world scenarios in several economic fields such as building industry, facility management, town planning or heritage conservation. In contrast to…

Computer Vision and Pattern Recognition · Computer Science 2018-05-30 Bernhard Japes , Jennifer Mack , Florian Rist , Katja Herzog , Reinhard Töpfer , Volker Steinhage

Plant phenotyping, that is, the quantitative assessment of plant traits including growth, morphology, physiology, and yield, is a critical aspect towards efficient and effective crop management. Currently, plant phenotyping is a manually…

Computer Vision and Pattern Recognition · Computer Science 2021-04-15 Annalisa Milella , Roberto Marani , Antonio Petitti , Giulio Reina

In plant phenotyping, accurate trait extraction from 3D point clouds of trees is still an open problem. For automatic modeling and trait extraction of tree organs such as blossoms and fruits, the semantically segmented point cloud of a tree…

Computer Vision and Pattern Recognition · Computer Science 2023-08-21 Lukas Meyer , Andreas Gilson , Oliver Scholz , Marc Stamminger

Advanced plant phenotyping technologies play a crucial role in targeted trait improvement and accelerating intelligent breeding. Due to the species diversity of plants, existing methods heavily rely on large-scale high-precision manually…

Computer Vision and Pattern Recognition · Computer Science 2025-05-21 Wentao Song , He Huang , Youqiang Sun , Fang Qu , Jiaqi Zhang , Longhui Fang , Yuwei Hao , Chenyang Peng

Plant phenotyping involves analyzing observable characteristics of plants to better understand their growth, health, and development. In the context of deep learning, this analysis is often approached through single-view classification or…

Computer Vision and Pattern Recognition · Computer Science 2025-09-11 Robin-Nico Kampa , Fabian Deuser , Konrad Habel , Norbert Oswald

Post-genomic research deals with challenging problems in screening genomes of organisms for particular functions or potential for being the targets of genetic engineering for desirable biological features. 'Phenotyping' of wild type and…

Quantitative Methods · Quantitative Biology 2010-09-06 Hesam T. Dashti , Jernej Tonejc , Adel Ardalan , Alireza F. Siahpirani , Sabrina Guettes , Zohreh Sharif , Liya Wang , Amir H. Assadi

Numerical plant models can predict the outcome of plant traits modifications resulting from genetic variations, on plant performance, by simulating physiological processes and their interaction with the environment. Optimization methods…

Quantitative Methods · Quantitative Biology 2017-06-20 Victor Picheny , Pierre Casadebaig , Ronan Trépos , Robert Faivre , David Da Silva , Patrick Vincourt , Evelyne Costes

Challenges in strawberry picking made selective harvesting robotic technology demanding. However, selective harvesting of strawberries is complicated forming a few scientific research questions. Most available solutions only deal with a…

Robotics · Computer Science 2023-01-11 Soran Parsa , Bappaditya Debnath , Muhammad Arshad Khan , Amir Ghalamzan E.

Phytolith analysis is a crucial tool for reconstructing past vegetation and human activities, but traditional methods are severely limited by labour-intensive, time-consuming manual microscopy. To address this bottleneck, we present…

Leaf segmentation is the most direct and effective way for high-throughput plant phenotype data analysis and quantitative researches of complex traits. Currently, the primary goal of plant phenotyping is to raise the accuracy of the…

Computer Vision and Pattern Recognition · Computer Science 2021-08-10 Ruohao Guo , Liao Qu , Dantong Niu , Zhenbo Li , Jun Yue

Monitoring orchards at the individual tree or fruit level throughout the growth season is crucial for plant phenotyping and horticultural resource optimization, such as chemical use and yield estimation. We present a 4D spatio-temporal…

Accurate semantic segmentation of terrestrial laser scanning (TLS) point clouds is limited by costly manual annotation. We propose a semi-automated, uncertainty-aware pipeline that integrates spherical projection, feature enrichment,…

Computer Vision and Pattern Recognition · Computer Science 2026-02-10 Fei Zhang , Rob Chancia , Josie Clapp , Amirhossein Hassanzadeh , Dimah Dera , Richard MacKenzie , Jan van Aardt

Accurate predictions and representations of plant growth patterns in simulated and controlled environments are important for addressing various challenges in plant phenomics research. This review explores various works on state-of-the-art…

Quantitative Methods · Quantitative Biology 2025-07-17 Mohamed Debbagh , Shangpeng Sun , Mark Lefsrud

This article presents GrowliFlower, a georeferenced, image-based UAV time series dataset of two monitored cauliflower fields of size 0.39 and 0.60 ha acquired in 2020 and 2021. The dataset contains RGB and multispectral orthophotos from…

Computer Vision and Pattern Recognition · Computer Science 2023-05-25 Jana Kierdorf , Laura Verena Junker-Frohn , Mike Delaney , Mariele Donoso Olave , Andreas Burkart , Hannah Jaenicke , Onno Muller , Uwe Rascher , Ribana Roscher

The advent of plant phenomics, coupled with the wealth of genotypic data generated by next-generation sequencing technologies, provides exciting new resources for investigations into and improvement of complex traits. However, these new…

Genomics · Quantitative Biology 2019-04-30 Gota Morota , Diego Jarquin , Malachy T. Campbell , Hiroyoshi Iwata

Dormant pruning for fresh market fruit trees is a relatively unexplored application of agricultural robotics for which few end-to-end systems exist. One of the biggest challenges in creating an autonomous pruning system is the need to…

Robotics · Computer Science 2021-03-05 Alexander You , Cindy Grimm , Abhisesh Silwal , Joseph R. Davidson

Automated segmentation of individual leaves of a plant in an image is a prerequisite to measure more complex phenotypic traits in high-throughput phenotyping. Applying state-of-the-art machine learning approaches to tackle leaf instance…

Computer Vision and Pattern Recognition · Computer Science 2019-03-25 Daniel Ward , Peyman Moghadam , Nicolas Hudson

In tomato greenhouse, phenotypic measurement is meaningful for researchers and farmers to monitor crop growth, thereby precisely control environmental conditions in time, leading to better quality and higher yield. Traditional phenotyping…

Computer Vision and Pattern Recognition · Computer Science 2025-03-10 Xiaobei Zhao , Xiangrong Zeng , Yihang Ma , Pengjin Tang , Xiang Li

Fruit tree image segmentation is an essential problem in automating a variety of agricultural tasks such as phenotyping, harvesting, spraying, and pruning. Many research papers have proposed a diverse spectrum of solutions suitable to…

Computer Vision and Pattern Recognition · Computer Science 2024-12-20 Il-Seok Oh