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Two different types of directed networks are investigated, transcriptional regulation networks and neural networks. The directed network structure are studied and also shown to reflect the different processes taking place on the networks.…

Disordered Systems and Neural Networks · Physics 2016-08-16 Andreas Grönlund

Graphs are pervasive in our everyday lives, with relevance to biology, the internet, and infrastructure, as well as numerous other applications. It is thus necessary to have an understanding as to how quickly a graph disintegrates, whether…

Social and Information Networks · Computer Science 2025-12-25 Jeremie Fish , Mahesh Banavar , Erik Bollt

Graph Neural Networks (GNNs) have boosted the performance of many graph related tasks such as node classification and graph classification. Recent researches show that graph neural networks are vulnerable to adversarial attacks, which…

Machine Learning · Computer Science 2019-10-01 Yao Ma , Suhang Wang , Tyler Derr , Lingfei Wu , Jiliang Tang

The edge-removal problem asks whether the removal of a $\lambda$-capacity edge from a given network can decrease the communication rate between source-terminal pairs by more than $\lambda$. In this short manuscript, we prove that for…

Information Theory · Computer Science 2020-05-22 Michael Langberg , Michelle Effros

This paper presents methods to compare networks where relationships between pairs of nodes in a given network are defined. We define such network distance by searching for the optimal method to embed one network into another network, prove…

Social and Information Networks · Computer Science 2018-02-14 Weiyu Huang , Alejandro Ribeiro

We study the conjectured relationship between the implicit regularization in neural networks, trained with gradient-based methods, and rank minimization of their weight matrices. Previously, it was proved that for linear networks (of depth…

Machine Learning · Computer Science 2024-12-24 Nadav Timor , Gal Vardi , Ohad Shamir

In the classical knot theory there is a well-known notion of descending diagram. From an arbitrary diagram one can easily obtain, by some crossing changes, a descending diagram which is a diagram of the unknot or unlink. In this paper the…

Geometric Topology · Mathematics 2007-05-23 Maciej Mroczkowski

This paper investigates a model reduction problem for linear directed network systems, in which the interconnections among the vertices are described by general weakly connected digraphs. First, the definitions of pseudo controllability and…

Optimization and Control · Mathematics 2019-11-12 Xiaodong Cheng , Jacquelien M. A. Scherpen

A given neural network in the brain is involved in many different tasks. This implies that, when considering a specific task, the network's connectivity contains a component which is related to the task and another component which can be…

Neurons and Cognition · Quantitative Biology 2021-03-17 Friedrich Schuessler , Alexis Dubreuil , Francesca Mastrogiuseppe , Srdjan Ostojic , Omri Barak

Link and node failures are two common fundamental problems that affect operational networks. Protection of communication networks against such failures is essential for maintaining network reliability and performance. Network protection…

Information Theory · Computer Science 2010-08-26 Salah A. Aly , Ahmed E. Kamal , Anwar I. Walid

Physical networks are made of nodes and links that are physical objects embedded in a geometric space. Understanding how the mutual volume exclusion between these elements affects the structure and function of physical networks calls for a…

Statistical Mechanics · Physics 2024-06-14 Gábor Pete , Ádám Timár , Sigurdur Örn Stefánsson , Ivan Bonamassa , Márton Pósfai

In this paper, we extend the analysis of random Kronecker graphs to multi-dimensional networks represented as tensors, enabling a more detailed and nuanced understanding of complex network structures. We decompose the adjacency tensor of…

Numerical Analysis · Mathematics 2025-06-30 Sanaa Khobizy

This work considers the robustness of uncertain consensus networks. The first set of results studies the stability properties of consensus networks with negative edge weights. We show that if either the negative weight edges form a cut in…

Optimization and Control · Mathematics 2015-03-03 Daniel Zelazo , Mathias Bürger

In this paper Moussouris' algorithm for the decomposition of spin networks is reviewed and the implicit assumptions made in the Decomposition Theorem relating a spin network with its state sum are examined. It is found that the theorem in…

Mathematical Physics · Physics 2012-10-03 Hans-Christian Ruiz

This paper (parts I and II) provides an expository introduction to monotone and near-monotone dynamical systems associated to biochemical networks, those whose graphs are consistent or near-consistent. Many conclusions can be drawn from…

Molecular Networks · Quantitative Biology 2007-05-23 Eduardo D. Sontag

It is common knowledge that a key dynamical characteristic of a network is its spectrum (the collection of all eigenvalues of the network's weighted adjacency matrix). In \cite{BW10} we demonstrated that it is possible to reduce a network,…

Dynamical Systems · Mathematics 2015-06-05 Leonid Bunimovich , Benjamin Webb

We introduce an efficient algorithm for reducing bond dimensions in an arbitrary tensor network without changing its geometry. The method is based on a novel, quantitative understanding of local correlations in a network. Together with a…

Strongly Correlated Electrons · Physics 2018-08-23 Markus Hauru , Clement Delcamp , Sebastian Mizera

We consider intrinsic linking and knotting in the context of directed graphs. We construct an example of a directed graph that contains a consistently oriented knotted cycle in every embedding. We also construct examples of intrinsically…

Geometric Topology · Mathematics 2017-12-29 Thomas Fleming , Joel Foisy

The ever-increasing knowledge of the structure of various real-world networks has uncovered their complex multi-mechanism-governed evolution processes. Therefore, a better understanding of the structure and evolution of these networked…

Physics and Society · Physics 2007-05-23 Ke Deng , Heping Zhao , Dejun Li

The aim of this article is to provide space level maps between configuration spaces of graphs that are predicted by algebraic manipulations of cellular chains. More explicitly, we consider edge contraction and half-edge deletion, and…

Algebraic Topology · Mathematics 2022-01-05 Sanjana Agarwal , Maya Banks , Nir Gadish , Dane Miyata