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In the non-uniform sparsest cut problem, we are given a supply graph G and a demand graph D, both with the same set of nodes V. The goal is to find a cut of V that minimizes the ratio of the total capacity on the edges of G crossing the cut…

Data Structures and Algorithms · Computer Science 2021-11-12 Vincent Cohen-Addad , Tobias Mömke , Victor Verdugo

In this paper we consider the problem of computing an mRNA sequence of maximal similarity for a given mRNA of secondary structure constraints, introduced by Backofen et al. in [BNS02] denoted as the MRSO problem. The problem is known to be…

Data Structures and Algorithms · Computer Science 2007-05-23 Frank Gurski

Many problems are known to be solvable in subexponential parameterized time when the input graph is planar. The bidimensionality framework of Demaine, Fomin, Hajiaghay, and Thilikos [JACM'05] and the treewidth-pattern-covering approach by…

Data Structures and Algorithms · Computer Science 2026-04-02 Matthias Bentert , Fedor V. Fomin , Petr A. Golovach

Let $S$ be an independent set of a simple undirected graph $G$. Suppose that each vertex of $S$ has a token placed on it. The tokens are allowed to be moved, one at a time, by sliding along the edges of $G$, so that after each move, the…

Discrete Mathematics · Computer Science 2024-10-10 Mathew C. Francis , Veena Prabhakaran

We obtain an algorithmic meta-theorem for the following optimization problem. Let \phi\ be a Counting Monadic Second Order Logic (CMSO) formula and t be an integer. For a given graph G, the task is to maximize |X| subject to the following:…

Data Structures and Algorithms · Computer Science 2013-09-09 Fedor Fomin , Ioan Todinca , Yngve Villanger

The treedepth of a graph $G$ is the least possible depth of an elimination forest of $G$: a rooted forest on the same vertex set where every pair of vertices adjacent in $G$ is bound by the ancestor/descendant relation. We propose an…

Data Structures and Algorithms · Computer Science 2022-05-06 Wojciech Nadara , Michał Pilipczuk , Marcin Smulewicz

We introduce the problem of finding a spanning tree along with a partition of the tree edges into fewest number of feasible sets, where constraints on the edges define feasibility. The motivation comes from wireless networking, where we…

Networking and Internet Architecture · Computer Science 2018-03-14 Magnus M. Halldorsson , Guy Kortsarz , Pradipta Mitra , Tigran Tonoyan

We give approximation schemes for Subset TSP and Steiner Tree on unit disk graphs, and more generally, on intersection graphs of similarly sized connected fat (not necessarily convex) polygons in the plane. As a first step towards this…

Data Structures and Algorithms · Computer Science 2026-03-30 Sándor Kisfaludi-Bak , Dániel Marx

We consider the problem of learning the structure of undirected graphical models with bounded treewidth, within the maximum likelihood framework. This is an NP-hard problem and most approaches consider local search techniques. In this…

Machine Learning · Computer Science 2012-12-12 K. S. Sesh Kumar , Francis Bach

We present an $(1+\varepsilon)$-approximation algorithm with quasi-polynomial running time for computing the maximum weight independent set of polygons out of a given set of polygons in the plane (specifically, the running time is $n^{O(…

Computational Geometry · Computer Science 2017-03-16 Anna Adamaszek , Sariel Har-Peled , Andreas Wiese

The local tree-width of a graph G=(V,E) is the function ltw^G: N -> N that associates with every natural number r the maximal tree-width of an r-neighborhood in G. Our main graph theoretic result is a decomposition theorem for graphs with…

Combinatorics · Mathematics 2007-05-23 Martin Grohe

We present an implementation and an experimental evaluation of an algorithm that, given a connected graph G (represented by adjacency lists), estimates in sublinear time, with a relative error, the Minimum Spanning Tree Weight of G; the…

Data Structures and Algorithms · Computer Science 2017-01-30 Gabriele Santi , Leonardo De Laurentiis

Outstanding achievements of graph neural networks for spatiotemporal time series analysis show that relational constraints introduce an effective inductive bias into neural forecasting architectures. Often, however, the relational…

Machine Learning · Computer Science 2023-08-03 Andrea Cini , Daniele Zambon , Cesare Alippi

We show that the Maximum Weight Independent Set problem (MWIS) can be solved in quasi-polynomial time on $H$-free graphs (graphs excluding a fixed graph $H$ as an induced subgraph) for every $H$ whose every connected component is a path or…

Data Structures and Algorithms · Computer Science 2025-09-24 Peter Gartland , Daniel Lokshtanov , Tomáš Masařík , Marcin Pilipczuk , Michał Pilipczuk , Paweł Rzążewski

We present the first polynomial-time approximation schemes, i.e., (1 + {\epsilon})-approximation algorithm for any constant {\epsilon} > 0, for the minimum three-edge connected spanning subgraph problem and the minimum three-vertex…

Data Structures and Algorithms · Computer Science 2017-01-31 Baigong Zheng

We study the notion of local treewidth in sparse random graphs: the maximum treewidth over all $k$-vertex subgraphs of an $n$-vertex graph. When $k$ is not too large, we give nearly tight bounds for this local treewidth parameter; we also…

Data Structures and Algorithms · Computer Science 2022-07-18 Hermish Mehta , Daniel Reichman

We present four novel approximation algorithms for finding triangulation of minimum treewidth. Two of the algorithms improve on the running times of algorithms by Robertson and Seymour, and Becker and Geiger that approximate the optimum by…

Data Structures and Algorithms · Computer Science 2013-01-14 Eyal Amir

The Subgraph Isomorphism problem is of considerable importance in computer science. We examine the problem when the pattern graph H is of bounded treewidth, as occurs in a variety of applications. This problem has a well-known algorithm via…

Data Structures and Algorithms · Computer Science 2021-05-12 Karl Bringmann , Jasper Slusallek

We develop fast approximation algorithms for the minimum-cost version of the Bounded-Degree MST problem (BD-MST) and its generalization the Crossing Spanning Tree problem (Crossing-ST). We solve the underlying LP to within a $(1+\epsilon)$…

Data Structures and Algorithms · Computer Science 2021-05-19 Chandra Chekuri , Kent Quanrud , Manuel R. Torres

Color-constrained subgraph problems are those where we are given an edge-colored (directed or undirected) graph and the task is to find a specific type of subgraph, like a spanning tree, an arborescence, a single-source shortest path tree,…

Data Structures and Algorithms · Computer Science 2024-07-24 P. S. Ardra , Jasine Babu , Kritika Kashyap , R. Krithika , Sreejith K. Pallathumadam , Deepak Rajendraprasad