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Computed tomography (CT) imaging could be very practical for diagnosing various diseases. However, the nature of the CT images is even more diverse since the resolution and number of the slices of a CT scan are determined by the machine and…

Image and Video Processing · Electrical Eng. & Systems 2022-07-11 Chih-Chung Hsu , Chi-Han Tsai , Guan-Lin Chen , Sin-Di Ma , Shen-Chieh Tai

Multiple instance learning (MIL) is a key algorithm for classification of whole slide images (WSI). Histology WSIs can have billions of pixels, which create enormous computational and annotation challenges. Typically, such images are…

Image and Video Processing · Electrical Eng. & Systems 2021-11-03 Andriy Myronenko , Ziyue Xu , Dong Yang , Holger Roth , Daguang Xu

Multi-site studies are becoming important to increase statistical power, enhance generalizability, and to improve the likelihood of pooling relevant subgroups together activities. Even with harmonized imaging sequences, site-dependent…

Neurons and Cognition · Quantitative Biology 2019-09-11 Sumra Bari , Enrico Amico , Nicole Vike , Thomas M. Talavage , Joaquín Goñi

Recently, pathological diagnosis has achieved superior performance by combining deep learning models with the multiple instance learning (MIL) framework using whole slide images (WSIs). However, the giga-pixeled nature of WSIs poses a great…

Computer Vision and Pattern Recognition · Computer Science 2024-10-31 Zijie Fang , Yifeng Wang , Ye Zhang , Zhi Wang , Jian Zhang , Xiangyang Ji , Yongbing Zhang

There has been significant progress in Masked Image Modeling (MIM). Existing MIM methods can be broadly categorized into two groups based on the reconstruction target: pixel-based and tokenizer-based approaches. The former offers a simpler…

Computer Vision and Pattern Recognition · Computer Science 2023-08-02 Yuan Liu , Songyang Zhang , Jiacheng Chen , Zhaohui Yu , Kai Chen , Dahua Lin

While model architectures and training strategies have become more generic and flexible with respect to different data modalities over the past years, a persistent limitation lies in the assumption of fixed quantities and arrangements of…

Image and Video Processing · Electrical Eng. & Systems 2023-11-07 Lisa Weijler , Florian Kowarsch , Michael Reiter , Pedro Hermosilla , Margarita Maurer-Granofszky , Michael Dworzak

Digital pathology has revolutionized the field by enabling the digitization of tissue samples into whole slide images (WSIs). However, the high resolution and large size of WSIs present significant challenges when it comes to applying Deep…

Computer Vision and Pattern Recognition · Computer Science 2025-07-03 Ali Mammadov , Loïc Le Folgoc , Guillaume Hocquet , Pietro Gori

Fast and accurate reconstruction of magnetic resonance (MR) images from under-sampled data is important in many clinical applications. In recent years, deep learning-based methods have been shown to produce superior performance on MR image…

Image and Video Processing · Electrical Eng. & Systems 2021-03-12 Pengfei Guo , Puyang Wang , Jinyuan Zhou , Shanshan Jiang , Vishal M. Patel

Detection and classification of pulmonary nodules is a challenge in medical image analysis due to the variety of shapes and sizes of nodules and their high concealment. Despite the success of traditional deep learning methods in image…

Image and Video Processing · Electrical Eng. & Systems 2025-02-28 Junji Lin , Yi Zhang , Yunyue Pan , Yuli Chen , Chengchang Pan , Honggang Qi

Multiple instance learning (MIL) has been successfully applied for whole slide images (WSIs) analysis in computational pathology, enabling a wide range of prediction tasks from tumor subtyping to inferring genetic mutations and multi-omics…

Computer Vision and Pattern Recognition · Computer Science 2024-07-25 Junyu Li , Ye Zhang , Wen Shu , Xiaobing Feng , Yingchun Wang , Pengju Yan , Xiaolin Li , Chulin Sha , Min He

We propose an end-to-end Multitask Learning Transformer framework, named MulT, to simultaneously learn multiple high-level vision tasks, including depth estimation, semantic segmentation, reshading, surface normal estimation, 2D keypoint…

Computer Vision and Pattern Recognition · Computer Science 2022-05-18 Deblina Bhattacharjee , Tong Zhang , Sabine Süsstrunk , Mathieu Salzmann

In computational pathology, weak supervision has become the standard for deep learning due to the gigapixel scale of WSIs and the scarcity of pixel-level annotations, with Multiple Instance Learning (MIL) established as the principal…

Computer Vision and Pattern Recognition · Computer Science 2025-12-17 Andreas Lolos , Theofilos Christodoulou , Aris L. Moustakas , Stergios Christodoulidis , Maria Vakalopoulou

In the era of foundation models, fine-tuning pre-trained models for specific downstream tasks has become crucial. This drives the need for robust fine-tuning methods to address challenges such as model overfitting and sparse labeling.…

Machine Learning · Computer Science 2025-12-12 Shikun Liu , Deyu Zou , Nima Shoghi , Victor Fung , Kai Liu , Pan Li

Recently, feature relation learning has drawn widespread attention in cross-spectral image patch matching. However, existing related research focuses on extracting diverse relations between image patch features and ignores sufficient…

Computer Vision and Pattern Recognition · Computer Science 2025-04-22 Chuang Yu , Yunpeng Liu , Jinmiao Zhao , Dou Quan , Zelin Shi , Xiangyu Yue

Whole-slide MIL models are often called context-aware once graphs, Transform ers, or state-space modules are placed above patch embeddings. We show that this label can be deceptive. On pathology tasks where tissue architecture is part of…

Computer Vision and Pattern Recognition · Computer Science 2026-05-19 Xiangyu Li , Ran Su

Segmenting tumors in histological images is vital for cancer diagnosis. While fully supervised models excel with pixel-level annotations, creating such annotations is labor-intensive and costly. Accurate histopathology image segmentation…

Computer Vision and Pattern Recognition · Computer Science 2024-07-16 Yinsheng He , Xingyu Li , Roger J. Zemp

Graph Neural Networks frequently exhibit significant performance degradation in the out-of-distribution test scenario. While test-time training (TTT) offers a promising solution, existing Parameter Finetuning (PaFT) paradigm suffer from…

Machine Learning · Computer Science 2026-01-30 Jiaxin Zhang , Yiqi Wang , Siwei Wang , Xihong Yang , Yu Shi , Xinwang Liu , En Zhu

Multiple instance learning (MIL) has been widely used for representing whole-slide pathology images. However, spatial, semantic, and decision entanglements among instances limit its representation and interpretability. To address these…

Computer Vision and Pattern Recognition · Computer Science 2025-11-05 Chentao Li , Behzad Bozorgtabar , Yifang Ping , Pan Huang , Jing Qin

Foundation models (FMs) for computer vision learn rich and robust representations, enabling their adaptation to task/domain-specific deployments with little to no fine-tuning. However, we posit that the very same strength can make…

Computer Vision and Pattern Recognition · Computer Science 2025-04-16 Ankita Raj , Deepankar Varma , Chetan Arora

Cross-modality person re-identification (cm-ReID) is a challenging but key technology for intelligent video analysis. Existing works mainly focus on learning common representation by embedding different modalities into a same feature space.…

Computer Vision and Pattern Recognition · Computer Science 2020-03-13 Yan Lu , Yue Wu , Bin Liu , Tianzhu Zhang , Baopu Li , Qi Chu , Nenghai Yu