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In an inspiring recent study, Xu et al. [Nat. Phys. 19, 46 (2023)] observed for a living active biofilm under circular confinement two emergent dynamic modes of collective motion in the film. One corresponds to global rotational motion of…

Soft Condensed Matter · Physics 2025-02-11 Henning Reinken , Andreas M. Menzel

The dynamics of the Reynolds stress tensor for turbulent flows is described with an evolution equation coupling both geometric effects and turbulent source terms. The effects of the mean flow geometry are shown up when the source terms are…

Classical Physics · Physics 2017-08-23 Sergey L. Gavrilyuk , Henri Gouin

Motivated by the motion of biopolymers and membranes in solution, this article presents a formulation of the equations of motion for curves and surfaces in a viscous fluid. We focus on geometrical aspects and simple variational methods for…

Soft Condensed Matter · Physics 2010-05-26 Thomas R. Powers

Locomotion is essential for living cells. It enables bacteria and algae to explore space for food, cancer to spread, and immune system to fight infections. Motile cells display trajectories of intriguing complexity, from regular (e.g.…

Soft Condensed Matter · Physics 2021-12-28 C. Misbah , M. S. Rizvi , W. F. Hu , T. S. Lin , S. Rafai , A. Farutin

At the macroscopic scale, many important models of collective motion fall into the class of kinematic flows for which both velocity and diffusion terms depend only on particle density. When total particle numbers are fixed and finite,…

Adaptation and Self-Organizing Systems · Physics 2022-04-12 Jeremy Worsfold , Tim Rogers , Paul Milewski

Coupled mixed convective and stratified systems are common in natural flows. To study experimentally the associated dynamics, we use a singular property of water: its non-linear equation of state is characterised by a maximum density close…

Fluid Dynamics · Physics 2020-11-10 Pierre Léard , Benjamin Favier , Patrice Le Gal , Michael Le Bars

We study the transport of bacteria in a porous media modeled by a square channel containing one cylindrical obstacle via molecular dynamics simulations coupled to a lattice Boltzmann fluid. Our bacteria model is a rod-shaped rigid body…

Soft Condensed Matter · Physics 2020-11-30 Miru Lee , Christoph Lohrmann , Kai Szuttor , Harold Auradou , Christian Holm

We propose a dynamical model for the erosive growth of a channel in a granular medium driven by subsurface water flow. The model is inferred from experimental data acquired with a laser-aided imaging technique. The evolution equation for…

Soft Condensed Matter · Physics 2007-05-23 A. E. Lobkovsky , B. Smith , A. Kudrolli , D. H. Rothman

Fluid flow in pipes with discontinuous cross section or with kinks is described through balance laws with a non conservative product in the source. At jump discontinuities in the pipes' geometry, the physics of the problem suggests how to…

Analysis of PDEs · Mathematics 2021-04-13 R. M. Colombo , G. Guerra , Y. Holle

We study the evolution of star-shaped sets in volume preserving mean curvature flow. Constructed by approximate minimizing movements, our solutions preserve a strong version of star-shapedness. We also show that the solutions converges to a…

Analysis of PDEs · Mathematics 2018-08-16 Inwon Kim , Dohyun Kwon

The problem of the diffusion evolution of a pore filled with molecular hydrogen in a spherical granule in a hydrogen medium is solved. The initial position of the pore is displaced relative to the center of the granule. A nonlinear system…

Mesoscale and Nanoscale Physics · Physics 2022-03-31 M. I. Kopp , P. N. Ostapchuk , V. V. Yanovsky

Near a solid boundary, E. coli swims in clockwise circular motion. We provide a hydrodynamic model for this behavior. We show that circular trajectories are natural consequences of force-free and torque-free swimming, and the hydrodynamic…

Soft Condensed Matter · Physics 2016-08-31 Eric Lauga , Willow R. DiLuzio , George M. Whitesides , Howard A. Stone

Double-diffusive instabilities are often invoked to explain enhanced transport in stably-stratified fluids. The most-studied natural manifestation of this process, fingering convection, commonly occurs in the ocean's thermocline and…

Fluid Dynamics · Physics 2015-05-19 A. Traxler , S. Stellmach , P. Garaud , T. Radko , N. Brummell

In a first order theory of dissipative hydrodynamics, we have simulated hydrodynamic evolution of QGP fluid with dissipation due to shear viscosity only. Simulation confirms that compared to an ideal fluid, energy density or temperature of…

Nuclear Theory · Physics 2007-05-23 A. K. Chaudhuri

Many mechanisms, functions and structures of life have been unraveled. However, the fundamental driving force that propelled chemical evolution and led to life has remained obscure. The 2nd law of thermodynamics, written as an equation of…

Populations and Evolution · Quantitative Biology 2009-10-15 Arto Annila , Erkki Annila

This paper aims to the conditions of traffic flow evolving to stability and the stability of equilibrium under demand time-varying of traffic networks. The general framework of the evolution of flow dynamics by adopting evolutionary game…

Physics and Society · Physics 2018-07-26 Xingguang Chen

Thermal convection is observed in molecular dynamic simulation of a fluidized granular system of nearly elastic hard disks moving under gravity, inside a rectangular box. Boundaries introduce no shearing or time dependence, but the energy…

Statistical Mechanics · Physics 2009-10-31 Rosa Ramirez , Dino Risso , Patricio Cordero

A fluid motion through the flow element is presented in the kind of an autooscillating system with the distributed parameters: mass, elasticity, viscosity. The system contains a self-excited oscillator and possesses a self-regulation on…

Fluid Dynamics · Physics 2007-05-23 S. L. Arsenjev

The convective transport in a multicomponent isothermal compressible fluid subject to the mass continuity equations is considered. The velocity is proportional to the negative pressure gradient, according to Darcy's law, and the pressure is…

Analysis of PDEs · Mathematics 2019-11-25 Pierre-Etienne Druet , Ansgar Jüngel

Many complex adaptive systems contain a large diversity of specialized components. The specialization at the level of the microscopic degrees of freedom, and diversity at the level of the system as a whole are phenomena that appear during…

adap-org · Physics 2007-05-23 Vivek S. Borkar , Sanjay Jain , Govindan Rangarajan