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Software is a central part of modern science, and knowledge of its use is crucial for the scientific community with respect to reproducibility and attribution of its developers. Several studies have investigated in-text mentions of software…
Software citation contributes to achieving software sustainability in two ways: It provides an impact metric to incentivize stakeholders to make software sustainable. It also provides references to software used in research, which can be…
In this article, we present the challenge of software citation as a method to ensure credit for and identification, discovery, and reuse of software in scientific and engineering research. We discuss related work and key challenges/research…
Knowledge about software used in scientific investigations is important for several reasons, for instance, to enable an understanding of provenance and methods involved in data handling. However, software is usually not formally cited, but…
In most fields, computational models and data analysis have become a significant part of how research is performed, in addition to the more traditional theory and experiment. Mathematics is no exception to this trend. While the system of…
Are others using software you've written in their research and citing it as you want it to be cited? Software can be cited in different ways, some good, and some not good at all for tracking and counting citations in indexers such as ADS…
The rise of software as a research object is mirrored in the increasing interests towards quantitative studies of scientific software. However, due to the inconsistent practice of citing software, most of the existing studies analyzing the…
The main output of the FORCE11 Software Citation working group (https://www.force11.org/group/software-citation-working-group) was a paper on software citation principles (https://doi.org/10.7717/peerj-cs.86) published in September 2016.…
Software is an important tool for scholarly work, but software produced for research is in many cases not easily identifiable or discoverable. A potential first step in linking research and software is software identification. In this paper…
The recognition of dataset names is a critical task for automatic information extraction in scientific literature, enabling researchers to understand and identify research opportunities. However, existing corpora for dataset mention…
Data is a cornerstone of empirical software engineering (ESE) research and practice. Data underpin numerous process and project management activities, including the estimation of development effort and the prediction of the likely location…
Software is foundationally important to scientific and social progress, however, traditional acknowledgment of the use of others' work has not adapted in step with the rapid development and use of software in research. This report outlines…
Software now lies at the heart of scholarly research. Here we argue that as well as being important from a methodological perspective, software should, in many instances, be recognised as an output of research, equivalent to an academic…
Software is a fundamental pillar of modern scientiic research, not only in computer science, but actually across all elds and disciplines. However, there is a lack of adequate means to cite and reference software, for many reasons. An…
Following the widespread digitalization of scholarship, software has become essential for research, but the current sociotechnical system of citation does not reflect this sufficiently. Citation provides context for research, but the…
This paper aims to tackle the challenge posed by the increasing integration of software tools in research across various disciplines by investigating the application of Falcon-7b for the detection and classification of software mentions…
Citations are the cornerstone of knowledge propagation and the primary means of assessing the quality of research, as well as directing investments in science. Science is increasingly becoming "data-intensive", where large volumes of data…
We describe the CZ Software Mentions dataset, a new dataset of software mentions in biomedical papers. Plain-text software mentions are extracted with a trained SciBERT model from several sources: the NIH PubMed Central collection and from…
Under the data-driven research paradigm, research software has come to play crucial roles in nearly every stage of scientific inquiry. Scholars are advocating for the formal citation of software in academic publications, treating it on par…
We present an analysis of data citation practices based on the Data Citation Index from Thomson Reuters. This database launched in 2012 aims to link data sets and data studies with citations received from the other citation indexes. The DCI…