English
Related papers

Related papers: Practical algorithms for Hierarchical overlap grap…

200 papers

The problem of finding dense components of a graph is a widely explored area in data analysis, with diverse applications in fields and branches of study including community mining, spam detection, computer security and bioinformatics. This…

Information Retrieval · Computer Science 2021-03-02 B. D. M. De Zoysa , Y. A. M. M. A. Ali , M. D. I. Maduranga , Indika Perera , Saliya Ekanayake , Anil Vullikanti

Heterogeneous graphs are ubiquitous data structures that can inherently capture multi-type and multi-modal interactions between objects. In recent years, research on encoding heterogeneous graph into latent representations have enjoyed a…

Social and Information Networks · Computer Science 2023-07-06 Chen Ling , Carl Yang , Liang Zhao

This paper studies the hierarchical clustering problem, where the goal is to produce a dendrogram that represents clusters at varying scales of a data set. We propose the ParChain framework for designing parallel hierarchical agglomerative…

Data Structures and Algorithms · Computer Science 2022-02-15 Shangdi Yu , Yiqiu Wang , Yan Gu , Laxman Dhulipala , Julian Shun

We present ROBO (Riemannian Overlapping Block Optimization), a distributed and parallel approach to multi-robot pose graph optimization (PGO) based on the idea of overlapping domain decomposition. ROBO offers a middle ground between…

Robotics · Computer Science 2026-03-05 Aneesa Sonawalla , Yulun Tian , Jonathan P. How

Densest Subgraph Problem (DSP) is an important primitive problem with a wide range of applications, including fraud detection, community detection and DNA motif discovery. Edge-based density is one of the most common metrics in DSP.…

Databases · Computer Science 2023-10-31 Yugao Zhu , Shenghua Liu , Wenjie Feng , Xueqi Cheng

Deep sequencing has enabled the investigation of a wide range of environmental microbial ecosystems, but the high memory requirements for {\em de novo} assembly of short-read shotgun sequencing data from these complex populations are an…

Genomics · Quantitative Biology 2015-06-03 Jason Pell , Arend Hintze , Rosangela Canino-Koning , Adina Howe , James M. Tiedje , C. Titus Brown

$ $We study the $d$-Uniform Hypergraph Matching ($d$-UHM) problem: given an $n$-vertex hypergraph $G$ where every hyperedge is of size $d$, find a maximum cardinality set of disjoint hyperedges. For $d\geq3$, the problem of finding the…

Data Structures and Algorithms · Computer Science 2020-09-22 Oussama Hanguir , Clifford Stein

To reduce computational complexity and delay in randomized network coded content distribution, and for some other practical reasons, coding is not performed simultaneously over all content blocks, but over much smaller, possibly overlapping…

Information Theory · Computer Science 2016-11-17 Yao Li , Emina Soljanin , Predrag Spasojevic

Distributed systems that manage and process graph-structured data internally solve a graph partitioning problem to minimize their communication overhead and query run-time. Besides computational complexity -- optimal graph partitioning is…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-03-24 Ruben Mayer , Hans-Arno Jacobsen

We study finite-sum nonlinear programs with localized variable coupling encoded by a (hyper)graph. We introduce a graph-compliant decomposition framework that brings message passing into continuous optimization in a rigorous, implementable,…

Optimization and Control · Mathematics 2026-01-19 Kuangyu Ding , Marie Maros , Gesualdo Scutari

Hypergraphs, a generalization of graphs, naturally represent groupwise relationships among multiple individuals or objects, which are common in many application areas, including web, bioinformatics, and social networks. The flexibility in…

Social and Information Networks · Computer Science 2021-04-21 Geon Lee , Minyoung Choe , Kijung Shin

In the subgraph counting problem, we are given a input graph $G(V, E)$ and a target graph $H$; the goal is to estimate the number of occurrences of $H$ in $G$. Our focus here is on designing sublinear-time algorithms for approximately…

Data Structures and Algorithms · Computer Science 2018-11-20 Sepehr Assadi , Michael Kapralov , Sanjeev Khanna

Exploration of task mappings plays a crucial role in achieving high performance in heterogeneous multi-processor system-on-chip (MPSoC) platforms. The problem of optimally mapping a set of tasks onto a set of given heterogeneous processors…

Performance · Computer Science 2014-07-01 Wei Quan , Andy D. Pimentel

Constructing a spanning tree of a graph is one of the most basic tasks in graph theory. We consider a relaxed version of this problem in the setting of local algorithms. The relaxation is that the constructed subgraph is a sparse spanning…

Data Structures and Algorithms · Computer Science 2021-04-28 Reut Levi , Dana Ron , Ronitt Rubinfeld

Maximum weight matching is one of the most fundamental combinatorial optimization problems with a wide range of applications in data mining and bioinformatics. Developing distributed weighted matching algorithms is challenging due to the…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-06 Sepehr Assadi , MohammadHossein Bateni , Vahab Mirrokni

In real life, it is always an urge to reach our goal in minimum effort i.e., it should have a minimum constrained path. The path may be shortest route in practical life, either physical or electronic medium. The scenario is to represents…

Neural and Evolutionary Computing · Computer Science 2014-01-14 Sounak Sadhukhan , Samar Sen Sarma

We study the classical scheduling problem on parallel machines %with precedence constraints where the precedence graph has the bounded depth $h$. Our goal is to minimize the maximum completion time. We focus on developing approximation…

Data Structures and Algorithms · Computer Science 2023-02-02 Bin Fu , Yumei Huo , Hairong Zhao

Graph clustering is a fundamental computational problem with a number of applications in algorithm design, machine learning, data mining, and analysis of social networks. Over the past decades, researchers have proposed a number of…

Data Structures and Algorithms · Computer Science 2017-11-06 He Sun , Luca Zanetti

We extend the concept of polynomial time approximation algorithms to apply to problems for hierarchically specified graphs, many of which are PSPACE-complete. Assuming P != PSPACE, the existence or nonexistence of such efficient…

Combinatorics · Mathematics 2016-09-06 Madhav V. Marathe , Harry B. Hunt , S. S. Ravi

Randomized parallel algorithms for many fundamental problems achieve optimal linear work in expectation, but upgrading this guarantee to hold with high probability (whp) remains a recurring theoretical challenge. In this paper, we address…

Data Structures and Algorithms · Computer Science 2026-03-03 Chase Hutton , Adam Melrod