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Inspired by the recent success of self-supervised methods applied on images, self-supervised learning on graph structured data has seen rapid growth especially centered on augmentation-based contrastive methods. However, we argue that…

Machine Learning · Computer Science 2021-12-08 Namkyeong Lee , Junseok Lee , Chanyoung Park

Hypergraphs generalize classical graphs by allowing a single edge to connect multiple vertices, providing a natural language for modeling higher-order interactions. Superhypergraphs extend this paradigm further by accommodating nested,…

Artificial Intelligence · Computer Science 2026-03-03 Takaaki Fujita , Florentin Smarandache

Neural network models have demonstrated impressive performance in predicting pathologies and outcomes from the 12-lead electrocardiogram (ECG). However, these models often need to be trained with large, labelled datasets, which are not…

Machine Learning · Computer Science 2022-04-12 Aniruddh Raghu , Divya Shanmugam , Eugene Pomerantsev , John Guttag , Collin M. Stultz

Network topology excels at structural predictions but fails to capture functional semantics encoded in biomedical literature. We present RAG-GNN, an end-to-end trainable retrieval-augmented graph neural network framework that integrates GNN…

Molecular Networks · Quantitative Biology 2026-05-14 Hasi Hays , William J. Richardson

Graph neural networks (GNNs) have found extensive applications in learning from graph data. However, real-world graphs often possess diverse structures and comprise nodes and edges of varying types. To bolster the generalization capacity of…

Machine Learning · Computer Science 2023-10-18 Haotao Wang , Ziyu Jiang , Yuning You , Yan Han , Gaowen Liu , Jayanth Srinivasa , Ramana Rao Kompella , Zhangyang Wang

Multi-view clustering is an important machine learning task for multi-media data, encompassing various domains such as images, videos, and texts. Moreover, with the growing abundance of graph data, the significance of multi-view graph…

Machine Learning · Computer Science 2024-10-31 Zichen Wen , Tianyi Wu , Yazhou Ren , Yawen Ling , Chenhang Cui , Xiaorong Pu , Lifang He

Graph neural networks have shown superior performance in a wide range of applications providing a powerful representation of graph-structured data. Recent works show that the representation can be further improved by auxiliary tasks.…

Machine Learning · Computer Science 2021-02-09 Dasol Hwang , Jinyoung Park , Sunyoung Kwon , Kyung-Min Kim , Jung-Woo Ha , Hyunwoo J. Kim

Graph representation learning (GRL) has emerged as an effective technique for modeling graph-structured data. When modeling heterogeneity and dynamics in real-world complex networks, GRL methods designed for complex heterogeneous temporal…

Social and Information Networks · Computer Science 2026-05-19 Huan Liu , Pengfei Jiao , Mengzhou Gao , Chaochao Chen , Di Jin

We consider the problem of graph generation guided by network statistics, i.e., the generation of graphs which have given values of various numerical measures that characterize networks, such as the clustering coefficient and the number of…

Social and Information Networks · Computer Science 2023-03-02 Jérôme Kunegis , Jun Sun , Eiko Yoneki

Data augmentation refers to a wide range of techniques for improving model generalization by augmenting training examples. Oftentimes such methods require domain knowledge about the dataset at hand, spawning a plethora of recent literature…

Machine Learning · Computer Science 2021-04-05 Heejung W. Chung , Avoy Datta , Chris Waites

Recent work has shown that data augmentation has the potential to significantly improve the generalization of deep learning models. Recently, automated augmentation strategies have led to state-of-the-art results in image classification and…

Computer Vision and Pattern Recognition · Computer Science 2019-11-15 Ekin D. Cubuk , Barret Zoph , Jonathon Shlens , Quoc V. Le

Graph-structured datasets usually have irregular graph sizes and connectivities, rendering the use of recent data augmentation techniques, such as Mixup, difficult. To tackle this challenge, we present the first Mixup-like graph…

Machine Learning · Computer Science 2021-12-21 Joonhyung Park , Hajin Shim , Eunho Yang

We study the implications of the modeling choice to use a graph, instead of a hypergraph, to represent real-world interconnected systems whose constituent relationships are of higher order by nature. Such a modeling choice typically…

Machine Learning · Computer Science 2024-01-17 Yanbang Wang , Jon Kleinberg

Deep learning methods for graphs achieve remarkable performance on many node-level and graph-level prediction tasks. However, despite the proliferation of the methods and their success, prevailing Graph Neural Networks (GNNs) neglect…

Machine Learning · Computer Science 2020-11-10 Emily Alsentzer , Samuel G. Finlayson , Michelle M. Li , Marinka Zitnik

Recently, graph neural networks have shown the superiority of modeling the complex topological structures in heterogeneous network-based recommender systems. Due to the diverse interactions among nodes and abundant semantics emerging from…

Machine Learning · Computer Science 2022-08-04 Tiankai Gu , Chaokun Wang , Cheng Wu , Jingcao Xu , Yunkai Lou , Changping Wang , Kai Xu , Can Ye , Yang Song

Data has become a foundational asset driving innovation across domains such as finance, healthcare, and e-commerce. In these areas, predictive modeling over relational tables is commonly employed, with increasing emphasis on reducing manual…

Databases · Computer Science 2025-08-29 Lianpeng Qiao , Ziqi Cao , Kaiyu Feng , Ye Yuan , Guoren Wang

Hypergraphs tackle the limitations of traditional graphs by introducing {\em hyperedges}. While graph edges connect only two nodes, hyperedges connect an arbitrary number of nodes along their edges. Also, the underlying message-passing…

Machine Learning · Computer Science 2024-09-17 Mehrad Soltani , Luis Rueda

Recently emerged Topological Deep Learning (TDL) methods aim to extend current Graph Neural Networks (GNN) by naturally processing higher-order interactions, going beyond the pairwise relations and local neighborhoods defined by graph…

Text-Attributed Graphs (TAGs) augment graph structures with natural language descriptions, facilitating detailed depictions of data and their interconnections across various real-world settings. However, existing TAG datasets predominantly…

Computation and Language · Computer Science 2024-11-26 Zhuofeng Li , Zixing Gou , Xiangnan Zhang , Zhongyuan Liu , Sirui Li , Yuntong Hu , Chen Ling , Zheng Zhang , Liang Zhao

The Graph Neural Network (GNN) has been widely used for graph data representation. However, the existing researches only consider the ideal balanced dataset, and the imbalanced dataset is rarely considered. Traditional methods such as…

Machine Learning · Computer Science 2022-05-10 S. Shi , Kai Qiao , Shuai Yang , L. Wang , J. Chen , Bin Yan