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Accurate and efficient simulation of infrared (IR) and Raman spectra is essential for molecular identification and structural analysis. Traditional quantum chemistry methods based on the harmonic approximation neglect anharmonicity and…

Chemical Physics · Physics 2025-10-07 Shengjiao Ji , Yujin Zhang , Zihan Zou , Bin Jiang , Jun Jiang , Yi Luo , Wei Hu

Ordinary and partial differential equations (ODEs/PDEs) play a paramount role in analyzing and simulating complex dynamic processes across all corners of science and engineering. In recent years machine learning tools are aspiring to…

Machine Learning · Computer Science 2021-06-11 Sifan Wang , Paris Perdikaris

In this paper, we implement Neural Ordinary Differential Equations in a Variational Autoencoder setting for generative time series modeling. An object-oriented approach to the code was taken to allow for easier development and research and…

Machine Learning · Computer Science 2022-01-14 M. L. Garsdal , V. Søgaard , S. M. Sørensen

Atom segmentation and localization, noise reduction and deblurring of atomic-resolution scanning transmission electron microscopy (STEM) images with high precision and robustness is a challenging task. Although several conventional…

Materials Science · Physics 2021-02-23 Ruoqian Lin , Rui Zhang , Chunyang Wang , Xiao-Qing Yang , Huolin L. Xin

We present a deep learning model trained to emulate the radiative transfer during the epoch of cosmological reionization. CRADLE (Cosmological Reionization And Deep LEarning) is an autoencoder convolutional neural network that uses…

Cosmology and Nongalactic Astrophysics · Physics 2019-11-06 Jonathan Chardin , Grégoire Uhlrich , Dominique Aubert , Nicolas Deparis , Nicolas Gillet , Pierre Ocvirk , Joseph Lewis

We implement a sample-efficient method for rapid and accurate emulation of semi-analytical galaxy formation models over a wide range of model outputs. We use ensembled deep learning algorithms to produce a fast emulator of an updated…

Astrophysics of Galaxies · Physics 2021-07-14 Edward J. Elliott , Carlton M. Baugh , Cedric G. Lacey

We propose a method to reproduce dynamic appearance textures with space-stationary but time-varying visual statistics. While most previous work decomposes dynamic textures into static appearance and motion, we focus on dynamic appearance…

Computer Vision and Pattern Recognition · Computer Science 2025-01-13 Chen Liu , Tobias Ritschel

Traditionally, calcium dynamics in neurons are modeled using partial differential equations (PDEs) and ordinary differential equations (ODEs). The PDE component focuses on reaction-diffusion processes, while the ODE component addresses…

Numerical Analysis · Mathematics 2024-07-23 Abel Gurung , Qingguang Guan

Ordinary differential equation (ODE) is widely used in modeling biological and physical processes in science. In this article, we propose a new reproducing kernel-based approach for estimation and inference of ODE given noisy observations.…

Methodology · Statistics 2021-10-26 Xiaowu Dai , Lexin Li

Many important tasks in chemistry revolve around molecules during reactions. This requires predictions far from the equilibrium, while most recent work in machine learning for molecules has been focused on equilibrium or near-equilibrium…

Machine Learning · Computer Science 2022-04-06 Johannes Gasteiger , Shankari Giri , Johannes T. Margraf , Stephan Günnemann

Chemical modelling serves two purposes in dynamical models: accounting for the effect of microphysics on the dynamics and providing observable signatures. Ideally, the former must be done as part of the hydrodynamic simulation but this…

Computational Physics · Physics 2021-09-15 J. Holdship , S. Viti , T. J. Haworth , J. D. Ilee

Increasing the layer number of on-chip photonic neural networks (PNNs) is essential to improve its model performance. However, the successively cascading of network hidden layers results in larger integrated photonic chip areas. To address…

Machine Learning · Computer Science 2023-02-08 Yun Zhao , Hang Chen , Min Lin , Haiou Zhang , Tao Yan , Xing Lin , Ruqi Huang , Qionghai Dai

Non-linear behavior in interstellar chemical models has been recognized for 25 years now. Different mechanisms account for the possibility of multiple fixed-points at steady state, characterized by the ionization degree of the gas. Chemical…

Astrophysics of Galaxies · Physics 2020-11-11 Evelyne Roueff , Jacques Le Bourlot

Nonlinear PDE solvers require fine space-time discretizations and local linearizations, leading to high memory cost and slow runtimes. Neural operators such as FNOs and DeepONets offer fast single-shot inference by learning…

Machine Learning · Computer Science 2025-10-23 Yifei Sun

Developing the proper representations for simulating high-speed flows with strong shock waves, rarefactions, and contact discontinuities has been a long-standing question in numerical analysis. Herein, we employ neural operators to solve…

Machine Learning · Computer Science 2024-04-23 Ahmad Peyvan , Vivek Oommen , Ameya D. Jagtap , George Em Karniadakis

The quasi-steady state approximation and time-scale separation are commonly applied methods to simplify models of biochemical reaction networks based on ordinary differential equations (ODEs). The concentrations of the "fast" species are…

Dynamical Systems · Mathematics 2016-05-10 Meritxell Sáez , Carsten Wiuf , Elisenda Feliu

Chemistry plays a key role in many astrophysical situations regulating the cooling and the thermal properties of the gas, which are relevant during gravitational collapse, the evolution of disks and the fragmentation process. In order to…

Astrophysics of Galaxies · Physics 2015-06-17 T. Grassi , S. Bovino , D. R. G. Schleicher , J. Prieto , D. Seifried , E. Simoncini , F. A. Gianturco

The efficiency of the transport of angular momentum and chemical elements inside intermediate-mass stars lacks proper calibration, thereby introducing uncertainties on a star's evolutionary pathway. Improvements require better estimation of…

Solar and Stellar Astrophysics · Physics 2021-06-09 Joey S. G. Mombarg , Timothy Van Reeth , Conny Aerts

We present the modules for stellar nucleosynthesis, stellar mass loss, and turbulent diffusion of the new COLIBRE subgrid model for cosmological hydrodynamical simulations of galaxy formation. COLIBRE models the thermal evolution of the…

Simulating abundances of stable water isotopologues, i.e. molecules differing in their isotopic composition, within climate models allows for comparisons with proxy data and, thus, for testing hypotheses about past climate and validating…

Atmospheric and Oceanic Physics · Physics 2023-11-28 Jonathan Wider , Jakob Kruse , Nils Weitzel , Janica C. Bühler , Ullrich Köthe , Kira Rehfeld
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