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Bayesian Networks (BNs) are useful tools giving a natural and compact representation of joint probability distributions. In many applications one needs to learn a Bayesian Network (BN) from data. In this context, it is important to…

Machine Learning · Computer Science 2012-07-02 Or Zuk , Shiri Margel , Eytan Domany

Random Boolean networks have been used widely to explore aspects of gene regulatory networks. A modified form of the model through which to systematically explore the effects of increasing the number of gene states has previously been…

Molecular Networks · Quantitative Biology 2023-02-06 Larry Bull

Most work in the area of statistical relational learning (SRL) is focussed on discrete data, even though a few approaches for hybrid SRL models have been proposed that combine numerical and discrete variables. In this paper we distinguish…

Machine Learning · Computer Science 2015-06-17 Jiuchuan Jiang , Manfred Jaeger

This paper presents a machine learning framework (GP-NODE) for Bayesian systems identification from partial, noisy and irregular observations of nonlinear dynamical systems. The proposed method takes advantage of recent developments in…

Machine Learning · Computer Science 2021-03-08 Mohamed Aziz Bhouri , Paris Perdikaris

Generalization is essential for deep learning. In contrast to previous works claiming that Deep Neural Networks (DNNs) have an implicit regularization implemented by the stochastic gradient descent, we demonstrate explicitly Bayesian…

Machine Learning · Computer Science 2019-10-23 Xinjie Lan , Kenneth E. Barner

With the increasing variety of services that e-commerce platforms provide, criteria for evaluating their success become also increasingly multi-targeting. This work introduces a multi-target optimization framework with Bayesian modeling of…

Machine Learning · Computer Science 2019-02-26 Qi Wang , Zhihui Ji , Huasheng Liu , Binqiang Zhao

We report a scalable hybrid quantum-classical machine learning framework to build Bayesian networks (BN) that captures the conditional dependence and causal relationships of random variables. The generation of a BN consists of finding a…

Machine Learning · Computer Science 2019-01-31 Radhakrishnan Balu , Ajinkya Borle

A useful approach to the mathematical analysis of large-scale biological networks is based upon their decompositions into monotone dynamical systems. This paper deals with two computational problems associated to finding decompositions…

Molecular Networks · Quantitative Biology 2007-05-23 Bhaskar DasGupta , German Andres Enciso , Eduardo Sontag , Yi Zhang

For three decades statistical mechanics has been providing a framework to analyse neural networks. However, the theoretically tractable models, e.g., perceptrons, random features models and kernel machines, or multi-index models and…

Machine Learning · Statistics 2025-06-02 Jean Barbier , Francesco Camilli , Minh-Toan Nguyen , Mauro Pastore , Rudy Skerk

Bayesian networks are a versatile and powerful tool to model complex phenomena and the interplay of their components in a probabilistically principled way. Moving beyond the comparatively simple case of completely observed, static data,…

Methodology · Statistics 2020-11-04 Marco Scutari

Identifying a coupled dynamical system out of many plausible candidates, each of which could serve as the underlying generator of some observed measurements, is a profoundly ill posed problem that commonly arises when modelling real world…

Neurons and Cognition · Quantitative Biology 2019-09-17 Amirhossein Jafarian , Peter Zeidman , Vladimir Litvak , Karl Friston

Modeling biological networks serves as both a major goal and an effective tool of systems biology in studying mechanisms that orchestrate the activities of gene products in cells. Biological networks are context specific and dynamic in…

Molecular Networks · Quantitative Biology 2014-02-20 Ye Tian , Bai Zhang , Eric P. Hoffman , Robert Clarke , Zhen Zhang , Ie-Ming Shih , Jianhua Xuan , David M. Herrington , Yue Wang

Generative adversarial networks (GANs) can implicitly learn rich distributions over images, audio, and data which are hard to model with an explicit likelihood. We present a practical Bayesian formulation for unsupervised and…

Machine Learning · Statistics 2017-11-09 Yunus Saatchi , Andrew Gordon Wilson

Dynamic Bayesian networks provide a compact and natural representation for complex dynamic systems. However, in many cases, there is no expert available from whom a model can be elicited. Learning provides an alternative approach for…

Artificial Intelligence · Computer Science 2013-01-30 Xavier Boyen , Nir Friedman , Daphne Koller

We develop the theory and practice of an approach to modelling and probabilistic inference in causal networks that is suitable when application-specific or analysis-specific constraints should inform such inference or when little or no data…

Artificial Intelligence · Computer Science 2017-05-16 Paul Beaumont , Michael Huth

The adoption of probabilistic models for the best individuals found so far is a powerful approach for evolutionary computation. Increasingly more complex models have been used by estimation of distribution algorithms (EDAs), which often…

Neural and Evolutionary Computing · Computer Science 2007-10-16 Leonardo Emmendorfer , Aurora Pozo

Recently several researchers have investigated techniques for using data to learn Bayesian networks containing compact representations for the conditional probability distributions (CPDs) stored at each node. The majority of this work has…

Machine Learning · Computer Science 2015-05-19 David Maxwell Chickering , David Heckerman , Christopher Meek

Currently, the genetic programming version of the gene-pool optimal mixing evolutionary algorithm (GP-GOMEA) is among the top-performing algorithms for symbolic regression (SR). A key strength of GP-GOMEA is its way of performing variation,…

Neural and Evolutionary Computing · Computer Science 2022-04-27 Marco Virgolin , Peter A. N. Bosman

In this report, we will be interested at Dynamic Bayesian Network (DBNs) as a model that tries to incorporate temporal dimension with uncertainty. We start with basics of DBN where we especially focus in Inference and Learning concepts and…

Artificial Intelligence · Computer Science 2012-04-12 Nabil ghanmy , Mohamed Ali Mahjoub , Najoua Essoukri Ben Amara

In literature there are several studies on the performance of Bayesian network structure learning algorithms. The focus of these studies is almost always the heuristics the learning algorithms are based on, i.e. the maximisation algorithms…

Machine Learning · Statistics 2012-08-28 Marco Scutari , Adriana Brogini