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Question Answering (QA) systems on patient-related data can assist both clinicians and patients. They can, for example, assist clinicians in decision-making and enable patients to have a better understanding of their medical history.…

Machine Learning · Computer Science 2023-11-09 Jayetri Bardhan , Kirk Roberts , Daisy Zhe Wang

This paper develops the first question answering dataset (DrugEHRQA) containing question-answer pairs from both structured tables and unstructured notes from a publicly available Electronic Health Record (EHR). EHRs contain patient records,…

Artificial Intelligence · Computer Science 2022-05-04 Jayetri Bardhan , Anthony Colas , Kirk Roberts , Daisy Zhe Wang

In today's digital world, seeking answers to health questions on the Internet is a common practice. However, existing question answering (QA) systems often rely on using pre-selected and annotated evidence documents, thus making them…

Computation and Language · Computer Science 2024-04-15 Juraj Vladika , Florian Matthes

Existing question answering (QA) datasets derived from electronic health records (EHR) are artificially generated and consequently fail to capture realistic physician information needs. We present Discharge Summary Clinical Questions…

While there has been substantial progress in factoid question-answering (QA), answering complex questions remains challenging, typically requiring both a large body of knowledge and inference techniques. Open Information Extraction (Open…

Artificial Intelligence · Computer Science 2017-04-20 Tushar Khot , Ashish Sabharwal , Peter Clark

The usage and amount of information available on the internet increase over the past decade. This digitization leads to the need for automated answering system to extract fruitful information from redundant and transitional knowledge…

Computation and Language · Computer Science 2022-02-03 Hariom A. Pandya , Brijesh S. Bhatt

With the rapid development in Transformer-based language models, the reading comprehension tasks on short documents and simple questions have been largely addressed. Long documents, specifically the scientific documents that are densely…

Information Retrieval · Computer Science 2025-03-05 Wanting Wang

The presence of detailed clinical information in electronic health record (EHR) systems presents promising prospects for enhancing patient care through automated retrieval techniques. Nevertheless, it is widely acknowledged that accessing…

Information Retrieval · Computer Science 2024-09-13 Abderrahim Oussama Batouche , Eugen Czeizler , Miika Koskinen , Tuomas Mirtti , Antti Sakari Rannikko

Most automated electronic medical record (EMR) pipelines remain output-oriented: they transcribe, extract, and summarize after the consultation, but they do not explicitly model what is already known, what is still missing, which…

Artificial Intelligence · Computer Science 2026-03-19 Zhenhai Pan , Yan Liu , Jia You

We describe our system for the ArchEHR-QA Shared Task on answering clinical questions using electronic health records (EHRs). Our approach uses large language models in two steps: first, to find sentences in the EHR relevant to a…

Computation and Language · Computer Science 2025-06-09 Sara Shields-Menard , Zach Reimers , Joshua Gardner , David Perry , Anthony Rios

Objective: Question answering (QA) systems have the potential to improve the quality of clinical care by providing health professionals with the latest and most relevant evidence. However, QA systems have not been widely adopted. This…

Computation and Language · Computer Science 2024-02-06 Gregory Kell , Angus Roberts , Serge Umansky , Linglong Qian , Davide Ferrari , Frank Soboczenski , Byron Wallace , Nikhil Patel , Iain J Marshall

Question answering (QA) in English has been widely explored, but multilingual datasets are relatively new, with several methods attempting to bridge the gap between high- and low-resourced languages using data augmentation through…

Computation and Language · Computer Science 2021-06-01 Arnab Debnath , Navid Rajabi , Fardina Fathmiul Alam , Antonios Anastasopoulos

Clinical Question Answering (QA) systems enable doctors to quickly access patient information from electronic health records (EHRs). However, training these systems requires significant annotated data, which is limited due to the expertise…

Computation and Language · Computer Science 2024-12-09 Fan Bai , Keith Harrigian , Joel Stremmel , Hamid Hassanzadeh , Ardavan Saeedi , Mark Dredze

Electronic Health Records (EHRs) are pivotal in clinical practices, yet their retrieval remains a challenge mainly due to semantic gap issues. Recent advancements in dense retrieval offer promising solutions but existing models, both…

Information Retrieval · Computer Science 2025-07-25 Zhengyun Zhao , Huaiyuan Ying , Yue Zhong , Sheng Yu

The vast majority of cybersecurity information is unstructured text, including critical data within databases such as CVE, NVD, CWE, CAPEC, and the MITRE ATT&CK Framework. These databases are invaluable for analyzing attack patterns and…

Cryptography and Security · Computer Science 2024-12-24 Tanjim Bin Faruk

This paper proposes a novel training method to improve the robustness of Extractive Question Answering (EQA) models. Previous research has shown that existing models, when trained on EQA datasets that include unanswerable questions,…

Computation and Language · Computer Science 2024-10-01 Son Quoc Tran , Matt Kretchmar

We propose a novel methodology to generate domain-specific large-scale question answering (QA) datasets by re-purposing existing annotations for other NLP tasks. We demonstrate an instance of this methodology in generating a large-scale QA…

Computation and Language · Computer Science 2018-09-05 Anusri Pampari , Preethi Raghavan , Jennifer Liang , Jian Peng

The problem of event extraction requires detecting the event trigger and extracting its corresponding arguments. Existing work in event argument extraction typically relies heavily on entity recognition as a preprocessing/concurrent step,…

Computation and Language · Computer Science 2021-02-08 Xinya Du , Claire Cardie

Electronic health records (EHRs) contain a vast amount of high-dimensional multi-modal data that can accurately represent a patient's medical history. Unfortunately, most of this data is either unstructured or semi-structured, rendering it…

Computation and Language · Computer Science 2023-12-06 Ashwyn Sharma , David I. Feldman , Aneesh Jain

Question Answering (QA) is a widely-used framework for developing and evaluating an intelligent machine. In this light, QA on Electronic Health Records (EHR), namely EHR QA, can work as a crucial milestone towards developing an intelligent…

Databases · Computer Science 2021-08-03 Junwoo Park , Youngwoo Cho , Haneol Lee , Jaegul Choo , Edward Choi
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