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We present a novel approach to automatically segment magnetic resonance (MR) images of the human brain into anatomical regions. Our methodology is based on a deep artificial neural network that assigns each voxel in an MR image of the brain…

Computer Vision and Pattern Recognition · Computer Science 2015-06-26 Alexandre de Brebisson , Giovanni Montana

This thesis presents and evaluates the Dilated Convolution with Learnable Spacings (DCLS) method. Through various supervised learning experiments in the fields of computer vision, audio, and speech processing, the DCLS method proves to…

Machine Learning · Computer Science 2024-08-14 Ismail Khalfaoui-Hassani

When delineating lesions from medical images, a human expert can always keep in mind the anatomical structure behind the voxels. However, although high-quality (though not perfect) anatomical information can be retrieved from computed…

Image and Video Processing · Electrical Eng. & Systems 2023-12-04 Rongzhao Zhang , Zhian Bai , Ruoying Yu , Wenrao Pang , Lingyun Wang , Lifeng Zhu , Xiaofan Zhang , Huan Zhang , Weiguo Hu

Purpose Automated segmentation of anatomical structures in medical image analysis is a prerequisite for autonomous diagnosis as well as various computer and robot aided interventions. Recent methods based on deep convolutional neural…

Computer Vision and Pattern Recognition · Computer Science 2020-09-22 Max-Heinrich Laves , Jens Bicker , Lüder A. Kahrs , Tobias Ortmaier

Arterial spin labeling (ASL) perfusion MRI allows direct quantification of regional cerebral blood flow (CBF) without exogenous contrast, enabling noninvasive measurements that can be repeated without constraints imposed by contrast…

Lymph node station (LNS) delineation from computed tomography (CT) scans is an indispensable step in radiation oncology workflow. High inter-user variabilities across oncologists and prohibitive laboring costs motivated the automated…

Image and Video Processing · Electrical Eng. & Systems 2021-09-21 Dazhou Guo , Xianghua Ye , Jia Ge , Xing Di , Le Lu , Lingyun Huang , Guotong Xie , Jing Xiao , Zhongjie Liu , Ling Peng , Senxiang Yan , Dakai Jin

Conventional deep learning models deal with images one-by-one, requiring costly and time-consuming expert labeling in the field of medical imaging, and domain-specific restriction limits model generalizability. Visual in-context learning…

Image-based diagnostic decision support systems (DDSS) utilizing deep learning have the potential to optimize clinical workflows. However, developing DDSS requires extensive datasets with expert annotations and is therefore costly.…

Computer Vision and Pattern Recognition · Computer Science 2024-10-29 Helen Schneider , Sebastian Nowak , Aditya Parikh , Yannik C. Layer , Maike Theis , Wolfgang Block , Alois M. Sprinkart , Ulrike Attenberger , Rafet Sifa

The purpose of this study is to develop a deep learning based method that can automatically generate segmentations on cone-beam CT (CBCT) for head and neck online adaptive radiation therapy (ART), where expert-drawn contours in planning CT…

Medical Physics · Physics 2021-02-02 Xiao Liang , Howard Morgan , Dan Nguyen , Steve Jiang

Segmentation and spatial alignment of ultrasound (US) imaging data acquired in the in first trimester are crucial for monitoring human embryonic growth and development throughout this crucial period of life. Current approaches are either…

Image and Video Processing · Electrical Eng. & Systems 2023-08-29 W. A. P. Bastiaansen , M. Rousian , R. P. M. Steegers-Theunissen , W. J. Niessen , A. H. J. Koning , S. Klein

Deep convolutional neural networks (CNNs) are state-of-the-art for semantic image segmentation, but typically require many labeled training samples. Obtaining 3D segmentations of medical images for supervised training is difficult and labor…

Computer Vision and Pattern Recognition · Computer Science 2019-07-29 Zhenlin Xu , Marc Niethammer

We propose an unsupervised deep learning method for atlas based registration to achieve segmentation and spatial alignment of the embryonic brain in a single framework. Our approach consists of two sequential networks with a specifically…

Image and Video Processing · Electrical Eng. & Systems 2020-05-14 Wietske A. P. Bastiaansen , Melek Rousian , Régine P. M. Steegers-Theunissen , Wiro J. Niessen , Anton Koning , Stefan Klein

In this work, we propose an adversarial attack-based data augmentation method to improve the deep-learning-based segmentation algorithm for the delineation of Organs-At-Risk (OAR) in abdominal Computed Tomography (CT) to facilitate…

Image and Video Processing · Electrical Eng. & Systems 2023-02-28 Shaoyan Pan , Shao-Yuan Lo , Min Huang , Chaoqiong Ma , Jacob Wynne , Tonghe Wang , Tian Liu , Xiaofeng Yang

In this work we address the task of semantic image segmentation with Deep Learning and make three main contributions that are experimentally shown to have substantial practical merit. First, we highlight convolution with upsampled filters,…

Computer Vision and Pattern Recognition · Computer Science 2017-05-15 Liang-Chieh Chen , George Papandreou , Iasonas Kokkinos , Kevin Murphy , Alan L. Yuille

Audio-visual segmentation (AVS) aims to segment objects in videos based on audio cues. Existing AVS methods are primarily designed to enhance interaction efficiency but pay limited attention to modality representation discrepancies and…

Computer Vision and Pattern Recognition · Computer Science 2025-07-29 Mingfeng Zha , Tianyu Li , Guoqing Wang , Peng Wang , Yangyang Wu , Yang Yang , Heng Tao Shen

Precise lens structure segmentation is essential for the design of intraocular lenses (IOLs) in cataract surgery. Existing deep segmentation networks typically weight all pixels equally under cross-entropy (CE) loss, overlooking the fact…

Computer Vision and Pattern Recognition · Computer Science 2025-08-13 Zunjie Xiao , Xiao Wu , Tianhang Liu , Lingxi Hu , Yinling Zhang , Xiaoqing Zhang , Risa Higashita , Jiang Liu

Currently, the diagnosis of Autism Spectrum Disorder (ASD) is dependent upon a subjective, time-consuming evaluation of behavioral tests by an expert clinician. Non-invasive functional MRI (fMRI) characterizes brain connectivity and may be…

Machine Learning · Computer Science 2020-05-26 Cooper J. Mellema , Alex Treacher , Kevin P. Nguyen , Albert Montillo

Purpose: To determine whether deep learning-based algorithms applied to breast MR images can aid in the prediction of occult invasive disease following the di- agnosis of ductal carcinoma in situ (DCIS) by core needle biopsy. Material and…

Computer Vision and Pattern Recognition · Computer Science 2017-11-30 Zhe Zhu , Michael Harowicz , Jun Zhang , Ashirbani Saha , Lars J. Grimm , E. Shelley Hwang , Maciej A. Mazurowski

Background: Accurate spinal structure measurement is crucial for assessing spine health and diagnosing conditions like spondylosis, disc herniation, and stenosis. Manual methods for measuring intervertebral disc height and spinal canal…

BACKGROUND AND PURPOSE: Cerebral aneurysm is one of the most common cerebrovascular diseases, and SAH caused by its rupture has a very high mortality and disability rate. Existing automatic segmentation methods based on DLMs with TOF-MRA…

Image and Video Processing · Electrical Eng. & Systems 2021-10-27 Meng Chen , Chen Geng , Dongdong Wang , Jiajun Zhang , Ruoyu Di , Fengmei Li , Zhiyong Zhou , Sirong Piao , Yuxin Li , Yaikang Dai