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We present a foundation model for brain MRI that can work with different combinations of imaging sequences. The model uses one encoder with learnable modality embeddings, conditional layer normalization, and a masked autoencoding objective…

Computer Vision and Pattern Recognition · Computer Science 2025-11-06 Minh Sao Khue Luu , Bair N. Tuchinov

The incorporation of neuroimaging techniques such as electroenchephalography (EEG) and functional near-infrared spectroscopy (fNIRS) has provided new opportunities for the analysis of dynamic brain processes involved in cognitive and motor…

Neurons and Cognition · Quantitative Biology 2026-03-25 Zaineb Ajra , Grégoire Vergotte , Stéphane Perrey , Lilian Evra , Simon Pla , Gérard Dray , Jacky Montmain , Binbin Xu

Brain network analysis has emerged as pivotal method for gaining a deeper understanding of brain functions and disease mechanisms. Despite the existence of various network construction approaches, shortcomings persist in the learning of…

Computer Vision and Pattern Recognition · Computer Science 2023-11-10 Yongcheng Zong , Shuqiang Wang

Electroencephalography (EEG) is an non-invasive method to record the electrical activity of the brain. The EEG signals are low bandwidth and recorded from multiple electrodes simultaneously in a time synchronized manner. Typical EEG signal…

Signal Processing · Electrical Eng. & Systems 2024-12-24 Sunil Kumar Kopparapu

Sleep stage classification is a widely discussed topic, due to its importance in the diagnosis of sleep disorders, e.g. insomnia. Analysis of the brain activity during sleep is necessary to gain further insight into the processing that…

Signal Processing · Electrical Eng. & Systems 2024-10-08 Alexander Edthofer , Iris Feldhammer , Thomas Fenzl , Andreas Körner , Matthias Kreuzer

Noise is an inherent part of neuronal dynamics, and thus of the brain. It can be observed in neuronal activity at different spatiotemporal scales, including in neuronal membrane potentials, local field potentials, electroencephalography,…

Neurons and Cognition · Quantitative Biology 2019-01-03 Daqing Guo , Matjaz Perc , Tiejun Liu , Dezhong Yao

Brain foundation models have achieved remarkable advances across a wide range of neuroscience tasks. However, most existing models are limited to a single functional modality, restricting their ability to exploit complementary…

Machine Learning · Computer Science 2026-05-18 Hanning Guo , Hanwen Bi , Farah Abdellatif , Andrei Galbenus , Jon. N. Shah , Abigail Morrison , Jürgen Dammers

Deficits in working memory, which includes both the ability to learn and to retain information short-term, are a hallmark of many cognitive disorders. Our study analyzes data from a neuroscience experiment on animal subjects, where…

Applications · Statistics 2025-12-23 Maria Laura Battagliola , Laura J. Benoit , Sarah Canetta , Shizhe Zhang , R. Todd Ogden

Brain computer interfaces (BCI) depend on reliable realtime detection of conscious EEG changes for example to control a video game. However, scalp recordings are contaminated with non-stationary noise, such as facial muscle activity and eye…

Signal Processing · Electrical Eng. & Systems 2023-07-04 Bernd Porr , Lucía Muñoz Bohollo

This study examines the efficacy of various neural network (NN) models in interpreting mental constructs via electroencephalogram (EEG) signals. Through the assessment of 16 prevalent NN models and their variants across four brain-computer…

Neurons and Cognition · Quantitative Biology 2023-09-26 Xia Chen , Xiangbin Teng , Han Chen , Yafeng Pan , Philipp Geyer

The cerebral cortex spontaneously displays different patterns of activity that evolve over time according to the brain state. Sleep, wakefulness, resting states, and attention are examples of a wide spectrum of physiological states that can…

Brain decoding involves the determination of a subject's cognitive state or an associated stimulus from functional neuroimaging data measuring brain activity. In this setting the cognitive state is typically characterized by an element of a…

Machine Learning · Statistics 2015-04-14 Nicole Croteau , Farouk S. Nathoo , Jiguo Cao , Ryan Budney

Electroencephalography (EEG) is a vital tool to measure and record brain activity in neuroscience and clinical applications, yet its potential is constrained by signal heterogeneity, low signal-to-noise ratios, and limited labeled datasets.…

Machine Learning · Computer Science 2024-09-20 Enze Shi , Kui Zhao , Qilong Yuan , Jiaqi Wang , Huawen Hu , Sigang Yu , Shu Zhang

Finding an appropriate representation of dynamic activities in the brain is crucial for many downstream applications. Due to its highly dynamic nature, temporally averaged fMRI (functional magnetic resonance imaging) can only provide a…

Machine Learning · Computer Science 2022-08-18 Sikun Lin , Shuyun Tang , Scott Grafton , Ambuj Singh

Quantum computing and the workings of the brain have many aspects in common and have been attracting increasing attention in academia and industry. The computation in both is parallel and non-discrete. Though the underlying physical…

Neurons and Cognition · Quantitative Biology 2019-11-14 Yasunao Katayama

The continuous development of artificial intelligence has a profound impact on biomedicine and other fields, providing new research ideas and technical methods. Brain-inspired computing is an important intersection between multimodal…

Artificial Intelligence · Computer Science 2026-02-03 Bihui Yu , Sibo Zhang , Lili Zhou , Jingxuan Wei , Linzhuang Sun , Liping Bu

Recent analyses combining advanced theoretical techniques and high-quality data from thousands of simultaneously recorded neurons provide strong support for the hypothesis that neural dynamics operate near the edge of instability across…

Neurons and Cognition · Quantitative Biology 2024-03-25 Rubén Calvo , Carles Martorell , Guillermo B. Morales , Serena Di Santo , Miguel A. Muñoz

Foundation models pretrained on large-scale datasets via self-supervised learning demonstrate exceptional versatility across various tasks. Due to the heterogeneity and hard-to-collect medical data, this approach is especially beneficial…

Computational Engineering, Finance, and Science · Computer Science 2024-03-05 Yanwu Yang , Chenfei Ye , Guinan Su , Ziyao Zhang , Zhikai Chang , Hairui Chen , Piu Chan , Yue Yu , Ting Ma

Electroencephalogram (EEG) signals play a crucial role in understanding brain activity and diagnosing neurological diseases. Because supervised EEG encoders are unable to learn robust EEG patterns and rely too heavily on expensive signal…

Machine Learning · Computer Science 2025-09-23 Junhong Lai , Jiyu Wei , Lin Yao , Yueming Wang

Deep understanding of electromagnetic signals is fundamental to dynamic spectrum management, intelligent transportation, autonomous driving and unmanned vehicle perception. The field faces challenges because electromagnetic signals differ…

Signal Processing · Electrical Eng. & Systems 2025-08-27 Luqing Luo , Wenjin Gui , Yunfei Liu , Ziyue Zhang , Yunxi Zhang , Fengxiang Wang , Zonghao Guo , Zizhi Ma , Xinzhu Liu , Hanxiang He , Jinhai Li , Xin Qiu , Wupeng Xie , Yangang Sun
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