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Graph Neural Networks (GNNs) are widely used to perform different machine learning tasks on graphs. As the size of the graphs grows, and the GNNs get deeper, training and inference time become costly in addition to the memory requirement.…

Machine Learning · Computer Science 2022-08-09 Md. Khaledur Rahman , Ariful Azad

Large data applications rely on storing data in massive, sparse graphs with millions to trillions of nodes. Graph-based methods, such as node prediction, aim for computational efficiency regardless of graph size. Techniques like localized…

Data Structures and Algorithms · Computer Science 2025-07-08 Yushen Huang , Ertai Luo , Reza Babenezhad , Yifan Sun

This paper explores sparsification methods as a form of regularization in Graph Neural Networks (GNNs) to address high memory usage and computational costs in large-scale graph applications. Using techniques from Network Science and Machine…

Machine Learning · Computer Science 2026-02-12 Charlotte Cambier van Nooten , Christos Aronis , Yuliya Shapovalova , Lucia Cavallaro

Graph refinement, or the task of obtaining subgraphs of interest from over-complete graphs, can have many varied applications. In this work, we extract trees or collection of sub-trees from image data by, first deriving a graph-based…

Computer Vision and Pattern Recognition · Computer Science 2020-06-03 Raghavendra Selvan , Thomas Kipf , Max Welling , Antonio Garcia-Uceda Juarez , Jesper H Pedersen , Jens Petersen , Marleen de Bruijne

Graph Neural Networks (GNNs) have achieved tremendous success in a variety of real-world applications by relying on the fixed graph data as input. However, the initial input graph might not be optimal in terms of specific downstream tasks,…

Machine Learning · Computer Science 2023-09-22 Beidi Zhao , Boxin Du , Zhe Xu , Liangyue Li , Hanghang Tong

We investigate graph signal reconstruction and sample selection for classification tasks. We present general theoretical characterisations of classification error applicable to multiple commonly used reconstruction methods, and compare that…

Signal Processing · Electrical Eng. & Systems 2025-09-16 Baskaran Sripathmanathan , Xiaowen Dong , Michael Bronstein

We study the maximum and minimum occupancy fraction of the antiferromagnetic Ising model in regular graphs. The minimizing problem is known to determine a computational threshold in the complexity of approximately sampling from the Ising…

Combinatorics · Mathematics 2024-12-25 Ewan Davies , Olivia LeBlanc

The subgraph isomorphism finding problem is a well-studied problem in the field of computer science and graph theory, and it aims to enumerate all instances of a query graph in the respective data graph. In this paper, we propose an…

Databases · Computer Science 2023-12-07 Zubair Ali Ansari , Muhammad Abulaish , Irfan Rashid Thoker , Jahiruddin

Many modern data analytics applications on graphs operate on domains where graph topology is not known a priori, and hence its determination becomes part of the problem definition, rather than serving as prior knowledge which aids the…

Information Theory · Computer Science 2020-01-03 Ljubisa Stankovic , Danilo Mandic , Milos Dakovic , Milos Brajovic , Bruno Scalzo , Shengxi Li , Anthony G. Constantinides

We address the problem of prediction of multivariate data process using an underlying graph model. We develop a method that learns a sparse partial correlation graph in a tuning-free and computationally efficient manner. Specifically, the…

Machine Learning · Statistics 2018-11-19 Arun Venkitaraman , Dave Zachariah

Graph neural networks (GNNs) learn to represent nodes by aggregating information from their neighbors. As GNNs increase in depth, their receptive field grows exponentially, leading to high memory costs. Several existing methods address this…

Machine Learning · Computer Science 2025-07-16 Taraneh Younesian , Daniel Daza , Emile van Krieken , Thiviyan Thanapalasingam , Peter Bloem

Graph sampling theory extends the traditional sampling theory to graphs with topological structures. As a key part of the graph sampling theory, subset selection chooses nodes on graphs as samples to reconstruct the original signal. Due to…

Information Theory · Computer Science 2022-01-03 Zhengpin Li , Zheng Wei , Jian Wang , Yun Lin , Byonghyo Shim

We propose a theoretical framework for training Graph Neural Networks (GNNs) on large input graphs via training on small, fixed-size sampled subgraphs. This framework is applicable to a wide range of models, including popular sampling-based…

Machine Learning · Computer Science 2023-10-18 Yeganeh Alimohammadi , Luana Ruiz , Amin Saberi

One main challenge in imbalanced graph classification is to learn expressive representations of the graphs in under-represented (minority) classes. Existing generic imbalanced learning methods, such as oversampling and imbalanced learning…

Machine Learning · Computer Science 2024-05-20 Rongrong Ma , Guansong Pang , Ling Chen

In this paper, we provide a Graph Fourier Transform based approach to downsample signals on graphs. For bandlimited signals on a graph, a test is provided to identify whether signal reconstruction is possible from the given downsampled…

Other Statistics · Statistics 2016-12-23 Nileshkumar Vaishnav , Aditya Tatu

Graph embedding techniques are pivotal in real-world machine learning tasks that operate on graph-structured data, such as social recommendation and protein structure modeling. Embeddings are mostly performed on the node level for learning…

Machine Learning · Computer Science 2022-04-26 Nan Wang , Lu Lin , Jundong Li , Hongning Wang

Finding important edges in a graph is a crucial problem for various research fields, such as network epidemics, signal processing, machine learning, and sensor networks. In this paper, we tackle the problem based on sampling theory on…

Signal Processing · Electrical Eng. & Systems 2024-07-16 Kenta Yanagiya , Koki Yamada , Yasuo Katsuhara , Tomoya Takatani , Yuichi Tanaka

As the popularity of graph data increases, there is a growing need to count the occurrences of subgraph patterns of interest, for a variety of applications. Many graphs are massive in scale and also fully dynamic (with insertions and…

Databases · Computer Science 2022-11-15 Kaixin Wang , Cheng Long , Da Yan , Jie Zhang , H. V. Jagadish

Sparsity-constrained optimization is an important and challenging problem that has wide applicability in data mining, machine learning, and statistics. In this paper, we focus on sparsity-constrained optimization in cases where the cost…

Machine Learning · Computer Science 2016-12-19 Feng Chen , Baojian Zhou

Graph Neural Networks (GNNs) have been extensively used for mining graph-structured data with impressive performance. However, because these traditional GNNs do not distinguish among various downstream tasks, embeddings embedded by them are…

Machine Learning · Computer Science 2024-09-20 Jianpeng Chen , Yujing Wang , Ming Zeng , Zongyi Xiang , Bitan Hou , Yunhai Tong , Ole J. Mengshoel , Yazhou Ren