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This article describes similarities of the scientific method and the free open source software development, and how reproducibility is the key of an healthy scientific production.

Computers and Society · Computer Science 2011-05-11 Alessandro Frigeri , Gisella Speranza

This paper introduces reproducible research, and explains its importance, benefits and challenges. Some important tools for conducting reproducible research in Transportation Research are also introduced. Moreover, the source code for…

Digital Libraries · Computer Science 2021-05-17 Zuduo Zheng

Biomedical research results are being published at a high rate, and with existing search engines, the vast amount of published work is usually easily accessible. However, reproducing published results, either experimental data or…

Molecular Networks · Quantitative Biology 2017-06-19 Kai-Wen Liang , Qinsi Wang , Cheryl Telmer , Divyaa Ravichandran , Peter Spirtes , Natasa Miskov-Zivanov

Reproducibility remains a central challenge in machine learning (ML), especially in collaborative eScience projects where teams iterate over data, features, and models. Current ML workflows are often dynamic yet fragmented, relying on…

Machine Learning · Computer Science 2025-06-23 Zhiwei Li , Carl Kesselman , Tran Huy Nguyen , Benjamin Yixing Xu , Kyle Bolo , Kimberley Yu

Academic Search is a timeless challenge that the field of Information Retrieval has been dealing with for many years. Even today, the search for academic material is a broad field of research that recently started working on problems like…

Information Retrieval · Computer Science 2023-11-01 Philipp Schaer , Johann Schaible , Leyla Jael Garcia Castro

Scientific communities naturally tend to organize around data ecosystems created by the combination of their observational devices, their data repositories, and the workflows essential to carry their research from observation to discovery.…

Networking and Internet Architecture · Computer Science 2021-06-30 Mark Asch , François Bodin , Micah Beck , Terry Moore , Michela Taufer , Martin Swany , Jean-Pierre Vilotte

The ubiquity of computation in modern scientific research inflicts new challenges for reproducibility. While most journals now require code and data be made available, the standards for organization, annotation, and validation remain lax,…

Other Quantitative Biology · Quantitative Biology 2022-10-07 Griffin Chure

A new generation of educational mathematics software is being shaped in ThEdu and other academic communities on the side of computer mathematics. Respective concepts and technologies have been clarified to an extent, which calls for…

History and Overview · Mathematics 2019-04-19 Walther Neuper

Open research data are heralded as having the potential to increase effectiveness, productivity, and reproducibility in science, but little is known about the actual practices involved in data search. The socio-technical problem of locating…

Digital Libraries · Computer Science 2020-03-12 Kathleen Gregory , Helena Cousijn , Paul Groth , Andrea Scharnhorst , Sally Wyatt

From more than half a century ago indexing scientific articles has been studied intensively to provide a more efficient data retrieval and to conserve researchers invaluable time. In the last two decades with the emergence of the World Wide…

Digital Libraries · Computer Science 2014-01-07 Azam Majooni , Mona Masood , Amir Akhavan

Context: A growing amount of code is written to explore and analyze data, often by data analysts who do not have a traditional background in programming, for example by journalists. Inquiry: The way such data anlysts write code is different…

Programming Languages · Computer Science 2020-02-17 Tomas Petricek

The ACM Lifelog Search Challenge (LSC) is a venue that welcomes and compares systems that support the exploration of lifelog data, and in particular the retrieval of specific information, through an interactive competition format. This…

Biology is perhaps the most complex of the sciences, given the incredible variety of chemical species that are interconnected in spatial and temporal pathways that are daunting to understand. Their interconnections lead to emergent…

Biological Physics · Physics 2023-09-11 Henry V. Jakubowski , Henry Agnew , Bartholomew E. Jardine , Herbert M. Sauro

The openCost project aims to enhance transparency in research funding by making publication-related costs publicly accessible, following FAIR principles. It introduces a metadata schema for cost data, allowing aggregation and analysis…

This is the second part of a small-scale explorative study in an effort to assess reproducibility issues specific to scientometrics research. This effort is motivated by the desire to generate empirical data to inform debates about…

Digital Libraries · Computer Science 2018-04-16 Theresa Velden , Sybille Hinze , Andrea Scharnhorst , Jesper Wiborg Schneider , Ludo Waltman

Software is now a vital scientific instrument, providing the tools for data collection and analysis across disciplines from bioinformatics and computational physics, to the humanities. The software used in research is often home-grown and…

Software Engineering · Computer Science 2019-03-15 Mario Rosado de Souza , Robert Haines , Markel Vigo , Caroline Jay

The dissemination of scholarly research is critical, yet researchers often lack the time and skills to create engaging content for popular media such as short-form videos. To address this gap, we explore the use of generative AI to help…

Human-Computer Interaction · Computer Science 2026-01-27 Meziah Ruby Cristobal , Hyeonjeong Byeon , Tze-Yu Chen , Ruoxi Shang , Donghoon Shin , Ruican Zhong , Tony Zhou , Gary Hsieh

As practitioners increasingly deploy machine learning models in critical domains such as health care, finance, and policy, it becomes vital to ensure that domain experts function effectively alongside these models. Explainability is one way…

Machine Learning · Computer Science 2022-02-07 Himabindu Lakkaraju , Dylan Slack , Yuxin Chen , Chenhao Tan , Sameer Singh

For decades, the use of HPC systems was limited to those in the physical sciences who had mastered their domain in conjunction with a deep understanding of HPC architectures and algorithms. During these same decades, consumer computing…

TECHDOC is an implemented system demonstrating the feasibility of generating multilingual technical documents on the basis of a language-independent knowledge base. Its application domain is user and maintenance instructions, which are…

cmp-lg · Computer Science 2008-02-03 Dietmar Rösner , Manfred Stede
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