Related papers: A History-dependent Dynamic Biot Model
We introduce a modified SIR model with memory for the dynamics of epidemic spreading in a constant population of individuals. Each individual is in one of the states susceptible (${\bf S}$), infected (${\bf I}$) or recovered (${\bf R}$). In…
In a recent paper, Zhou et al. [Mech Time-Depend Mater (2017) 21: 151] studied the time-dependent properties of Glass Fiber Reinforced Polymers composites by employing a new rheological model with a time-dependent viscosity coefficient.…
We provide a fully nonlinear port-Hamiltonian formulation for discrete elastodynamical systems as well as a structure-preserving time discretization. The governing equations are obtained in a variational manner and represent index-1…
We introduce a new class of nonparametric prior distributions on the space of continuously varying densities, induced by Dirichlet process mixtures which diffuse in time. These select time-indexed random functions without jumps, whose…
The human microbiome is a complex ecological system, and describing its structure and function under different environmental conditions is important from both basic scientific and medical perspectives. Viewed through a biostatistical lens,…
Epigenetic histone modifications play an important role in the maintenance of different cell phenotypes. The exact molecular mechanism for inheritance of the modification patterns over cell generations remains elusive. We construct a…
Multilayered poroelastic structures are found in many biological tissues such as cartilage and the cornea, and play a key role in the design of bioartificial organs and other bioengineering applications. Motivated by these applications, we…
We propose a new finite element method for the three-field formulation of Biot's consolidation model in poroelasticity and prove a priori error estimates. Uniform-in-time error estimates of all the unknowns are obtained for both…
Microbial ecosystems are commonly modeled by fixed interactions between species in steady exponential growth states. However, microbes often modify their environments so strongly that they are forced out of the exponential state into…
We propose a new full discretization of the Biot's equations in poroelasticity. The construction is driven by the inf-sup theory, which we recently developed. It builds upon the four-field formulation of the equations obtained by…
An explicit finite-difference scheme is presented for solving the two-dimensional Biot equations of poroelasticity across the full range of frequencies. The key difficulty is to discretize the Johnson-Koplik-Dashen (JKD) model which…
The aim of the present study is to derive the effective quasi-static behaviour of a composite medium, made of a poroelastic matrix containing elastic impervious inclusions. For this purpose, the asymptotic homogenisation method is used. On…
This work introduces and analyzes a finite element scheme for evolution problems involving fractional-in-time and in-space differentiation operators up to order two. The left-sided fractional-order derivative in time we consider is employed…
In this paper, we present a novel solution strategy for the Cahn-Hilliard-Biot model, a three-way coupled system that features the interplay of solid phase separation, fluid dynamics, and elastic deformations in porous media. It is a…
This article shows how to specify and construct a discrete, stochastic, continuous-time model specifically for ecological systems. The model is more broad than typical chemical kinetics models in two ways. First, using time-dependent hazard…
We present a numerical method to model the dynamics of inextensible biomembranes in a quasi-Newtonian incompressible flow, which better describes hemorheology in the small vasculature. We consider a level set model for the fluid-membrane…
Microbes are everywhere, including in and on our bodies, and have been shown to play key roles in a variety of prevalent human diseases. Consequently, there has been intense interest in the design of bacteriotherapies or "bugs as drugs,"…
This work extends the hydro-mechanical phase-field fracture model to non-isothermal conditions with micromechanics based poroelasticity, which degrades Biot's coefficient not only with the phase-field variable (damage) but also with the…
We develop a mixed finite element method for the coupled problem arising in the interaction between a free fluid governed by the Stokes equations and flow in deformable porous medium modeled by the Biot system of poroelasticity. Mass…
In this work, we introduce a novel algorithm for the Biot problem based on a Hybrid High-Order discretization of the mechanics and a Symmetric Weighted Interior Penalty discretization of the flow. The method has several assets, including,…