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This paper investigates the reproducibility of computational science research and identifies key challenges facing the community today. It is the result of the First Summer School on Experimental Methodology in Computational Science…

Computational experiments have become essential for scientific discovery, allowing researchers to test hypotheses, analyze complex datasets, and validate findings. However, as computational experiments grow in scale and complexity, ensuring…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-04-03 Eleni Adamidi , Panayiotis Deligiannis , Nikos Foutris , Thanasis Vergoulis

Students enrolled in software engineering degrees are generally required to undertake a research project in their final year through which they demonstrate the ability to conduct research, communicate outcomes, and build in-depth expertise…

Software Engineering · Computer Science 2023-02-14 Chetan Arora , Laura Tubino , Andrew Cain , Kevin Lee , Vasudha Malhotra

Writing complex computer programs to study scientific problems requires careful planning and an in-depth knowledge of programming languages and tools. In this chapter the importance of using the right tool for the right problem is…

Computational Physics · Physics 2010-06-17 Helmut G. Katzgraber

The disconnect between distributed software artifacts and their supposed source code enables attackers to leverage the build process for inserting malicious functionality. Past research in this field focuses on compiled language ecosystems,…

Software Engineering · Computer Science 2025-08-13 Timo Pohl , Pavel Novák , Marc Ohm , Michael Meier

BACKGROUND: Software engineering is a human activity. People naturally make sense of their activities and experience through storytelling. But storytelling does not appear to have been properly studied by software engineering research. AIM:…

Software Engineering · Computer Science 2021-05-03 Austen Rainer

Empirical research in reverse engineering and software protection is crucial for evaluating the efficacy of methods designed to protect software against unauthorized access and tampering. However, conducting such studies with professional…

Software Engineering · Computer Science 2026-03-05 Tab , Zhang , Bjorn De Sutter , Christian Collberg , Bart Coppens , Waleed Mebane

Open-source scientific software is a major driver of scientific progress, yet its development and reuse remain difficult in collaborative settings. Researchers repeatedly face four recurring challenges: discovering and reproducing existing…

Digital Libraries · Computer Science 2026-04-22 Jan Philipp Albrecht , Deborah Schmidt , Lucas Rieckert , Maximilian Otto , Kyle Harrington

The use of third-party packages is becoming increasingly popular and has led to the emergence of large software package ecosystems with a maze of inter-dependencies. Since the reliance on these ecosystems enables developers to reduce…

Software Engineering · Computer Science 2023-06-21 Raula Gaikovina Kula , Katsuro Inoue , Christoph Treude

Context: Scientific software plays an important role in critical decision making, for example making weather predictions based on climate models, and computation of evidence for research publications. Recently, scientists have had to…

Software Engineering · Computer Science 2018-04-06 Upulee Kanewala , James M. Bieman

Software is now a vital scientific instrument, providing the tools for data collection and analysis across disciplines from bioinformatics and computational physics, to the humanities. The software used in research is often home-grown and…

Software Engineering · Computer Science 2019-03-15 Mario Rosado de Souza , Robert Haines , Markel Vigo , Caroline Jay

Small to medium-scale data science experiments often rely on research software developed ad-hoc by individual scientists or small teams. Often there is no time to make the research software fast, reusable, and open access. The consequence…

Software Engineering · Computer Science 2022-11-10 Moritz Schubotz , Ankit Satpute , Andre Greiner-Petter , Akiko Aizawa , Bela Gipp

A series of tutorials, assessments, and instructor guides are presented as a complete package for an upper-level undergraduate, or lower-level graduate, laboratory-based course, or extended new-student seminar. The purpose of this package…

Physics Education · Physics 2024-04-26 Glen D. Gillen

Context: Mining software repositories is a popular means to gain insights into a software project's evolution, monitor project health, support decisions and derive best practices. Tools supporting the mining process are commonly applied by…

Software Engineering · Computer Science 2025-11-13 Nicole Hoess , Carlos Paradis , Rick Kazman , Wolfgang Mauerer

Scientific code is not production software. Scientific code participates in the evaluation of a scientific hypothesis. This imposes specific constraints on the code that are often overlooked in practice. We articulate, with a small example,…

General Literature · Computer Science 2019-04-25 Fabien Benureau , Nicolas Rougier

So far, the relationship between open science and software engineering expertise has largely focused on the open release of software engineering research insights and reproducible artifacts, in the form of open-access papers, open data, and…

Software Engineering · Computer Science 2024-09-17 Cynthia C. S. Liem , Andrew M. Demetriou

Integrating research evidence into practice is one of the main goals of Evidence-Based Software Engineering (EBSE). Secondary studies, one of the main EBSE products, are intended to summarize the best research evidence and make them easily…

Software Engineering · Computer Science 2020-03-24 Bruno Cartaxo , Gustavo Pinto , Sergio Soares

Software is at the core of most scientific discoveries today. Therefore, the quality of research results highly depends on the quality of the research software. Rigorous testing, as we know it from software engineering in the industry,…

Software Engineering · Computer Science 2024-12-20 Michael Dorner , Andreas Bauer , Florian Angermeir

Background: Machine learning algorithms are widely used to predict defect prone software components. In this literature, computational experiments are the main means of evaluation, and the credibility of results depends on experimental…

Software Engineering · Computer Science 2026-01-27 Giuseppe Destefanis , Leila Yousefi , Martin Shepperd , Allan Tucker , Stephen Swift , Steve Counsell , Mahir Arzoky

This paper presents the results of a research study related to software system failures, with the goal of understanding how we might better evolve, maintain and support software systems in production. We have qualitatively analyzed thirty…

Software Engineering · Computer Science 2020-08-26 Jonathan Sillito , Esdras Kutomi