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Dimensionality reduction methods such as t-SNE and UMAP are popular methods for visualizing data with a potential (latent) clustered structure. They are known to group data points at the same time as they embed them, resulting in…

Machine Learning · Computer Science 2025-09-04 Elizabeth Coda , Ery Arias-Castro , Gal Mishne

Dimensionality reduction techniques are widely used for visualizing high-dimensional data. However, support for interpreting patterns of dimension reduction results in the context of the original data space is often insufficient.…

Human-Computer Interaction · Computer Science 2024-04-15 Brian Montambault , Gabriel Appleby , Jen Rogers , Camelia D. Brumar , Mingwei Li , Remco Chang

Dimensionality Reduction (DR) techniques can generate 2D projections and enable visual exploration of cluster structures of high-dimensional datasets. However, different DR techniques would yield various patterns, which significantly affect…

Human-Computer Interaction · Computer Science 2021-10-07 Jiazhi Xia , Yuchen Zhang , Jie Song , Yang Chen , Yunhai Wang , Shixia Liu

As the deployment of computer vision technology becomes increasingly common in science, the need for explanations of the system and its output has become a focus of great concern. Driven by the pressing need for interpretable models in…

Computer Vision and Pattern Recognition · Computer Science 2023-12-01 Daniel Schug , Sai Yerramreddy , Rich Caruana , Craig Greenberg , Justyna P. Zwolak

Dimensionality reduction (DR) plays a crucial role in various fields, including data engineering and visualization, by simplifying complex datasets while retaining essential information. However, achieving both high DR accuracy and strong…

Machine Learning · Computer Science 2025-07-01 Zelin Zang , Yuhao Wang , Jinlin Wu , Hong Liu , Yue Shen , Zhen Lei , Stan. Z Li

Low-dimensional embeddings and visualizations are an indispensable tool for analysis of high-dimensional data. State-of-the-art methods, such as tSNE and UMAP, excel in unveiling local structures hidden in high-dimensional data and are…

Machine Learning · Computer Science 2023-02-01 Jonas Fischer , Rebekka Burkholz , Jilles Vreeken

Interpretability is a crucial aspect of machine learning models that enables humans to understand and trust the decision-making process of these models. In many real-world applications, the interpretability of models is essential for legal,…

Machine Learning · Statistics 2023-07-18 Shree Charran R , Sandipan Das Mahapatra

Multimodal fusion of remote sensing images serves as a core technology for overcoming the limitations of single-source data and improving the accuracy of surface information extraction, which exhibits significant application value in fields…

Computer Vision and Pattern Recognition · Computer Science 2026-01-12 Siyu Zhang , Lianlei Shan , Runhe Qiu

We present a visualization algorithm based on a novel unsupervised Siamese neural network training regime and loss function, called Differentiating Embedding Networks (DEN). The Siamese neural network finds differentiating or similar…

Machine Learning · Computer Science 2020-06-12 Isaac Robinson

Dimension reduction (DR) algorithms have proven to be extremely useful for gaining insight into large-scale high-dimensional datasets, particularly finding clusters in transcriptomic data. The initial phase of these DR methods often…

Machine Learning · Computer Science 2025-10-15 Yingfan Wang , Yiyang Sun , Haiyang Huang , Cynthia Rudin

Dimensionality reduction methods are employed to decrease data dimensionality, either to enhance machine learning performance or to facilitate data visualization in two or three-dimensional spaces. These methods typically fall into two…

Machine Learning · Computer Science 2025-08-26 Berat Dogan

Compared to "black-box" models, like random forests and deep neural networks, explainable boosting machines (EBMs) are considered "glass-box" models that can be competitively accurate while also maintaining a higher degree of transparency…

Machine Learning · Statistics 2023-11-14 Brandon M. Greenwell , Annika Dahlmann , Saurabh Dhoble

Dimensionality Reduction (DR) is widely used for visualizing high-dimensional data, often with the goal of revealing expected cluster structure. However, such a structure may not always appear in the projections. Existing DR quality metrics…

Machine Learning · Computer Science 2025-09-05 Diede P. M. van der Hoorn , Alessio Arleo , Fernando V. Paulovich

Dimension reduction (DR) techniques such as t-SNE, UMAP, and TriMAP have demonstrated impressive visualization performance on many real world datasets. One tension that has always faced these methods is the trade-off between preservation of…

Machine Learning · Computer Science 2021-08-27 Yingfan Wang , Haiyang Huang , Cynthia Rudin , Yaron Shaposhnik

Dimensionality reduction (DR) is a popular method for preparing and analyzing high-dimensional data. Reduced data representations are less computationally intensive and easier to manage and visualize, while retaining a significant…

Machine Learning · Computer Science 2022-05-02 Avraam Bardos , Ioannis Mollas , Nick Bassiliades , Grigorios Tsoumakas

Dimension reduction (DR) is commonly utilized to capture the intrinsic structure and transform high-dimensional data into low-dimensional space while retaining meaningful properties of the original data. It is used in various applications,…

Machine Learning · Computer Science 2022-11-29 Zelin Zang , Shenghui Cheng , Linyan Lu , Hanchen Xia , Liangyu Li , Yaoting Sun , Yongjie Xu , Lei Shang , Baigui Sun , Stan Z. Li

We present a new technique for visualizing high-dimensional data called cluster MDS (cl-MDS), which addresses a common difficulty of dimensionality reduction methods: preserving both local and global structures of the original sample in a…

Graphics · Computer Science 2024-05-27 Patricia Hernández-León , Miguel A. Caro

We propose a new dimensionality reduction toolkit designed to address some of the challenges faced by traditional methods like UMAP and tSNE such as loss of global structure and computational efficiency. Built on the JAX framework, DiRe…

Machine Learning · Computer Science 2025-08-19 Alexander Kolpakov , Igor Rivin

Explainable boosting machines (EBMs) are popular "glass-box" models that learn a set of univariate functions using boosting trees. These achieve explainability through visualizations of each feature's effect. However, unlike linear model…

Machine Learning · Statistics 2026-03-31 Haimo Fang , Kevin Tan , Jonathan Pipping-Gamon , Giles Hooker

Dimensionality reduction and clustering techniques are frequently used to analyze complex data sets, but their results are often not easy to interpret. We consider how to support users in interpreting apparent cluster structure on scatter…

Machine Learning · Computer Science 2021-11-08 Xander Vankwikelberge , Bo Kang , Edith Heiter , Jefrey Lijffijt
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