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Motivated by mutation processes occurring in in-vivo DNA-storage applications, a channel that mutates stored strings by duplicating substrings as well as substituting symbols is studied. Two models of such a channel are considered: one in…

Information Theory · Computer Science 2020-07-01 Yuanyuan Tang , Yonatan Yehezkeally , Moshe Schwartz , Farzad Farnoud

We consider coding schemes for computationally bounded channels, which can introduce an arbitrary set of errors as long as (a) the fraction of errors is bounded with high probability by a parameter $p$ and (b) the process which adds the…

Information Theory · Computer Science 2013-03-01 Venkatesan Guruswami , Adam Smith

Subspace codes and rank-metric codes can be used to correct errors and erasures in network, with linear network coding. Subspace codes were introduced by Koetter and Kschischang to correct errors and erasures in networks where topology is…

Information Theory · Computer Science 2012-02-07 Hessam Mahdavifar , Alexander Vardy

In this paper, we investigate binary reconstruction codes capable of correcting one deletion and one substitution. We define the \emph{single-deletion single-substitution ball} function $ \mathcal{B} $ as a mapping from a sequence to the…

Information Theory · Computer Science 2025-05-08 Yuling Li , Yubo Sun , Gennian Ge

The problem of error control in random linear network coding is addressed from a matrix perspective that is closely related to the subspace perspective of K\"otter and Kschischang. A large class of constant-dimension subspace codes is…

Information Theory · Computer Science 2019-05-07 Danilo Silva , Frank R. Kschischang , Ralf Kötter

Recent work by Smagloy et al. (ISIT 2020) shows that the redundancy of a single-deletion $s$-substitution correcting code is asymptotically at least $(s+1)\log n+o(\log n)$, where $n$ is the length of the codes. They also provide a…

Information Theory · Computer Science 2020-11-24 Wentu Song , Nikita Polyanskii , Kui Cai , Xuan He

In this paper, we discuss two-stage encoding algorithms capable of correcting a fraction of asymmetric errors. Suppose that the encoder transmits $n$ binary symbols $(x_1,\ldots,x_n)$ one-by-one over the Z-channel, in which a 1 is received…

Information Theory · Computer Science 2022-01-12 Alexey Lebedev , Vladimir Lebedev , Nikita Polyanskii

The problem of correcting deletions and insertions has recently received significantly increased attention due to the DNA-based data storage technology, which suffers from deletions and insertions with extremely high probability. In this…

Information Theory · Computer Science 2023-11-09 Tuan Thanh Nguyen , Kui Cai , Paul H. Siegel

Motivated by DNA-based data storage, we investigate a system where digital information is stored in an unordered set of several vectors over a finite alphabet. Each vector begins with a unique index that represents its position in the whole…

Information Theory · Computer Science 2019-01-23 Andreas Lenz , Paul H. Siegel , Antonia Wachter-Zeh , Eitan Yaakobi

We study codes that are list-decodable under insertions and deletions. Specifically, we consider the setting where a codeword over some finite alphabet of size $q$ may suffer from $\delta$ fraction of adversarial deletions and $\gamma$…

Information Theory · Computer Science 2018-02-26 Bernhard Haeupler , Amirbehshad Shahrasbi , Madhu Sudan

Block codes are considered for improving the reliability of messages stored in a computer memory with both stuck-at defects and random errors. It is assumed that the side information about the state of the defects is available to the…

Information Theory · Computer Science 2026-05-22 Ivana Djurdjevic , Robert Mateescu , Cyril Guyot

We introduce fast-decodable indexing schemes for edit distance which can be used to speed up edit distance computations to near-linear time if one of the strings is indexed by an indexing string $I$. In particular, for every length $n$ and…

Data Structures and Algorithms · Computer Science 2019-04-11 Bernhard Haeupler , Aviad Rubinstein , Amirbehshad Shahrasbi

The DNA storage channel is considered, in which a codeword is comprised of $M$ unordered DNA molecules. At reading time, $N$ molecules are sampled with replacement, and then each molecule is sequenced. A coded-index concatenated-coding…

Information Theory · Computer Science 2022-05-23 Nir Weinberger

This paper proposes a method for designing error correction codes by combining a known coding scheme with an autoencoder. Specifically, we integrate an LDPC code with a trained autoencoder to develop an error correction code for intractable…

Information Theory · Computer Science 2020-03-03 Eren Balevi , Jeffrey G. Andrews

In this paper, we design a deep learning-based convolutional autoencoder for channel coding and modulation. The objective is to develop an adaptive scheme capable of operating at various signal-to-noise ratios (SNR)s without the need for…

Signal Processing · Electrical Eng. & Systems 2025-07-01 Ahmad Abdel-Qader , Anas Chaaban , Mohamed S. Shehata

In coding theory, an error-correcting code can be encoded either systematically or non-systematically. In a systematic encode, the input data is embedded in the encoded output. Conversely, in a non-systematic code, the output does not…

Information Theory · Computer Science 2023-08-17 Mengfan Zheng

Locally Decodable Codes (LDCs) are error-correcting codes for which individual message symbols can be quickly recovered despite errors in the codeword. LDCs for Hamming errors have been studied extensively in the past few decades, where a…

Information Theory · Computer Science 2025-12-30 Jeremiah Blocki , Kuan Cheng , Elena Grigorescu , Xin Li , Yu Zheng , Minshen Zhu

Semantic segmentation is the task of classifying each pixel in an image. Training a segmentation model achieves best results using annotated images, where each pixel is annotated with the corresponding class. When obtaining fine annotations…

Computer Vision and Pattern Recognition · Computer Science 2025-10-20 Jort de Jong , Mike Holenderski

Error correcting codes play a central role in digital communication, ensuring that transmitted information can be accurately reconstructed despite channel impairments. Recently, autoencoder (AE) based approaches have gained attention for…

Information Theory · Computer Science 2025-11-13 Vukan Ninkovic , Dejan Vukobratovic

Rank modulation is a way of encoding information to correct errors in flash memory devices as well as impulse noise in transmission lines. Modeling rank modulation involves construction of packings of the space of permutations equipped with…

Information Theory · Computer Science 2011-10-13 Arya Mazumdar , Alexander Barg , Gilles Zémor
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