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While the animal bioacoustics community at large is collecting huge amounts of acoustic data at an unprecedented pace, processing these data is problematic. Currently in bioacoustics, there is no effective way to achieve high performance…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-05-06 Peter J. Dugan , Christopher W. Clark , Yann André LeCun , Sofie M. Van Parijs

Narwhal is one of the most mysterious marine mammals, due to its isolated habitat in the Arctic region. Tagging is a technology that has the potential to explore the activities of this species, where behavioral information can be collected…

Fish tracking is a key technology for obtaining movement trajectories and identifying abnormal behavior. However, it faces considerable challenges, including occlusion, multi-scale tracking, and fish deformation. Notably, extant reviews…

Computer Vision and Pattern Recognition · Computer Science 2023-11-07 Weiran Li , Zhenbo Li , Fei Li , Meng Yuan , Chaojun Cen , Yanyu Qi , Qiannan Guo , You Li

Most deep-learning frameworks for understanding biological swarms are designed to fit perceptive models of group behavior to individual-level data (e.g., spatial coordinates of identified features of individuals) that have been separately…

Computational Engineering, Finance, and Science · Computer Science 2021-08-24 Taeyeong Choi , Benjamin Pyenson , Juergen Liebig , Theodore P. Pavlic

Modeling tap or click sequences of users on a mobile device can improve our understandings of interaction behavior and offers opportunities for UI optimization by recommending next element the user might want to click on. We analyzed a…

Machine Learning · Computer Science 2021-08-12 Xin Zhou , Yang Li

This work focuses on the formation of mating aggregates in zooplankton. In particular, sexual encounters are behaviourally supported by males actively swimming in search for females, and approaching them for mating once they are found.…

Populations and Evolution · Quantitative Biology 2022-05-19 Ron Shnapp , François-Gaël Michalec , Markus Holzner

We have recently introduced an efficient method for the detection and identification of modules in complex networks, based on the de-synchronization properties (dynamical clustering) of phase oscillators. In this paper we apply the…

Populations and Evolution · Quantitative Biology 2009-11-13 Alessandro Pluchino , Andrea Rapisarda , Vito Latora

The ability to use inexpensive, noninvasive sensors to accurately classify flying insects would have significant implications for entomological research, and allow for the development of many useful applications in vector control for both…

Machine Learning · Computer Science 2014-03-12 Yanping Chen , Adena Why , Gustavo Batista , Agenor Mafra-Neto , Eamonn Keogh

Understanding and predicting interactions between predators and prey and their environment are fundamental for understanding food web structure, dynamics, and ecosystem function in both terrestrial and marine ecosystems.Thus, estimating the…

Methodology · Statistics 2023-08-29 H. Solvang , S. Imori , M. Biuw , U. Lindstrøm , T. Haug

Plankton are small drifting organisms found throughout the world's oceans and can be indicators of ocean health. One component of this plankton community is the zooplankton, which includes gelatinous animals and crustaceans (e.g. shrimp),…

Computer Vision and Pattern Recognition · Computer Science 2025-05-30 Fukun Liu , Adam T. Greer , Gengchen Mai , Jin Sun

We aim to investigate advancing the state of the art of detection, classification and localization (DCL) in the field of bioacoustics. The two primary goals are to develop transferable technologies for detection and classification in: (1)…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-05-06 Peter J. Dugan , Christopher W. Clark , Yann André LeCun , Sofie M. Van Parijs

The structure of ecological interactions is commonly understood through analyses of interaction networks. However, these analyses may be sensitive to sampling biases in both the interactors (the nodes of the network) and interactions (the…

The Crab Pulsar is known to feature plasma lensing events known as echoes. These events are characterized by additional components in the pulse profile which are produced by additional images formed when the pulsar's radio emission is…

High Energy Astrophysical Phenomena · Physics 2026-05-27 Thierry Serafin Nadeau , Marten H. van Kerkwijk , Jing Luo , Robert Main , Kiyoshi W. Masui , James W. McKee , Ue-Li Pen

Community detection is a popular approach to understand the organization of interactions in static networks. For that purpose, the Clique Percolation Method (CPM), which involves the percolation of k-cliques, is a well-studied technique…

Social and Information Networks · Computer Science 2024-05-27 Alexis Baudin , Lionel Tabourier , Clémence Magnien

Nowadays online searches are undeniably the most common form of information gathering, as witnessed by billions of clicks generated each day on search engines. In this work we describe online searches as foraging processes that take place…

Physics and Society · Physics 2017-04-05 Xiangwen Wang , Michel Pleimling

The collection of wild larvae seed as a source of raw material is a major sub industry of shellfish aquaculture. To predict when, where and in what quantities wild seed will be available, it is necessary to track the appearance and growth…

Artificial Intelligence · Computer Science 2007-05-23 Vitorino Ramos , Jonathan Campbell , John Slater , John Gillespie , Ivan F. Bendezu , Fionn Murtagh

Bioacoustics data from Passive acoustic monitoring (PAM) poses a unique set of challenges for classification, particularly the limited availability of complete and reliable labels in datasets due to annotation uncertainty, biological…

The current approach to exploring and monitoring complex underwater ecosystems, such as coral reefs, is to conduct surveys using diver-held or static cameras, or deploying sensor buoys. These approaches often fail to capture the full…

Citizen science biodiversity data present great opportunities for ecology and conservation across vast spatial and temporal scales. However, the opportunistic nature of these data lacks the sampling structure required by modeling…

Machine Learning · Computer Science 2025-04-15 Nahian Ahmed , Mark Roth , Tyler A. Hallman , W. Douglas Robinson , Rebecca A. Hutchinson

Computer-aided analysis of biological microscopy data has seen a massive improvement with the utilization of general-purpose deep learning techniques. Yet, in microscopy studies of multi-organism systems, the problem of collision and…

Computer Vision and Pattern Recognition · Computer Science 2023-10-09 Albert Alonso , Julius B. Kirkegaard