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We introduce an explainability method for biomedical hypothesis generation systems, built on top of the novel Hypothesis Generation Context Retriever framework. Our approach combines semantic graph-based retrieval and relevant…

Information Retrieval · Computer Science 2025-11-11 Ilya Tyagin , Saeideh Valipour , Aliaksandra Sikirzhytskaya , Michael Shtutman , Ilya Safro

We propose a large language model explainability technique for obtaining faithful natural language explanations by grounding the explanations in a reasoning process. When converted to a sequence of tokens, the outputs of the reasoning…

Machine Learning · Computer Science 2026-03-17 Vojtech Cahlik , Rodrigo Alves , Pavel Kordik

Question answering is one of the most important and difficult applications at the border of information retrieval and natural language processing, especially when we talk about complex science questions which require some form of inference…

Computation and Language · Computer Science 2019-05-08 George-Sebastian Pirtoaca , Traian Rebedea , Stefan Ruseti

Despite recent progress in text-to-image (T2I) generation, existing models often struggle to faithfully capture user intentions from short and under-specified prompts. While prior work has attempted to enhance prompts using large language…

Computer Vision and Pattern Recognition · Computer Science 2025-05-26 Mingrui Wu , Lu Wang , Pu Zhao , Fangkai Yang , Jianjin Zhang , Jianfeng Liu , Yuefeng Zhan , Weihao Han , Hao Sun , Jiayi Ji , Xiaoshuai Sun , Qingwei Lin , Weiwei Deng , Dongmei Zhang , Feng Sun , Qi Zhang , Rongrong Ji

Trustworthiness is an essential prerequisite for the real-world application of large language models. In this paper, we focus on the trustworthiness of language models with respect to retrieval augmentation. Despite being supported with…

Computation and Language · Computer Science 2024-10-23 Zongmeng Zhang , Yufeng Shi , Jinhua Zhu , Wengang Zhou , Xiang Qi , Peng Zhang , Houqiang Li

State-of-the-art machine learning models often learn spurious correlations embedded in the training data. This poses risks when deploying these models for high-stake decision-making, such as in medical applications like skin cancer…

Computer Vision and Pattern Recognition · Computer Science 2023-03-28 Frederik Pahde , Maximilian Dreyer , Wojciech Samek , Sebastian Lapuschkin

When the world changes, so does the text that humans write about it. How do we build language models that can be easily updated to reflect these changes? One popular approach is retrieval-augmented generation, in which new documents are…

Computation and Language · Computer Science 2024-06-18 Belinda Z. Li , Emmy Liu , Alexis Ross , Abbas Zeitoun , Graham Neubig , Jacob Andreas

Interpretable multi-hop reading comprehension (RC) over multiple documents is a challenging problem because it demands reasoning over multiple information sources and explaining the answer prediction by providing supporting evidences. In…

Computation and Language · Computer Science 2020-02-12 Ming Tu , Kevin Huang , Guangtao Wang , Jing Huang , Xiaodong He , Bowen Zhou

Relation extraction (RE) is a standard information extraction task playing a major role in downstream applications such as knowledge discovery and question answering. Although decoder-only large language models are excelling in generative…

Computation and Language · Computer Science 2025-07-28 Yuhang Jiang , Ramakanth Kavuluru

Addressing the challenge of adapting pre-trained vision-language models for generating insightful explanations for visual reasoning tasks with limited annotations, we present ReVisE: a $\textbf{Re}$cursive $\textbf{Vis}$ual…

Computer Vision and Pattern Recognition · Computer Science 2023-11-22 Jiaxin Ge , Sanjay Subramanian , Trevor Darrell , Boyi Li

Chemical language models, combined with reinforcement learning (RL), have shown significant promise to efficiently traverse large chemical spaces for drug discovery. However, the performance of various RL algorithms and their best practices…

Machine Learning · Computer Science 2025-11-06 Morgan Thomas , Albert Bou , Jose Carlos Gómez-Tamayo , Gary Tresadern , Mazen Ahmad , Gianni De Fabritiis

Explainable recommendation is a technique that combines prediction and generation tasks to produce more persuasive results. Among these tasks, textual generation demands large amounts of data to achieve satisfactory accuracy. However,…

Social and Information Networks · Computer Science 2024-05-28 Hao Cheng , Shuo Wang , Wensheng Lu , Wei Zhang , Mingyang Zhou , Kezhong Lu , Hao Liao

Evaluating the alignment between textual prompts and generated images is critical for ensuring the reliability and usability of text-to-image (T2I) models. However, most existing evaluation methods rely on coarse-grained metrics or static…

Computer Vision and Pattern Recognition · Computer Science 2026-02-24 Fulin Shi , Wenyi Xiao , Bin Chen , Liang Din , Leilei Gan

Scientific knowledge discovery increasingly relies on large language models, yet many existing scholarly assistants depend on proprietary systems with tens or hundreds of billions of parameters. Such reliance limits reproducibility and…

Information Retrieval · Computer Science 2026-04-23 Florian Kelber , Matthias Jobst , Yuni Susanti , Michael Färber

Retrieval-augmented generation methods often neglect the quality of content retrieved from external knowledge bases, resulting in irrelevant information or potential misinformation that negatively affects the generation results of large…

Computation and Language · Computer Science 2025-05-09 Yun Jiang , Zilong Xie , Wei Zhang , Yun Fang , Shuai Pan

The data-to-equation (Data2Eqn) task aims to discover interpretable mathematical equations that map observed values to labels, offering physical insights and broad applicability across academic and industrial domains. Genetic programming…

Machine Learning · Computer Science 2025-05-22 Wangyang Ying , Haoyue Bai , Nanxu Gong , Xinyuan Wang , Sixun Dong , Haifeng Chen , Yanjie Fu

Recent text-guided image editing (TIE) models have achieved remarkable progress, however, many edited results still suffer from artifacts, unintended modifications, and suboptimal aesthetics. Although several benchmarks and evaluation…

Computer Vision and Pattern Recognition · Computer Science 2026-05-11 Honghua Chen , Zitong Xu , Huiyu Duan , Xinyun Zhang , Xiongkuo Min , Guangtao Zhai

Recent large language models often answer factual questions correctly. But users can't trust any given claim a model makes without fact-checking, because language models can hallucinate convincing nonsense. In this work we use reinforcement…

Deep learning models have achieved remarkable success in different areas of machine learning over the past decade; however, the size and complexity of these models make them difficult to understand. In an effort to make them more…

Computer Vision and Pattern Recognition · Computer Science 2022-06-20 Vikram V. Ramaswamy , Sunnie S. Y. Kim , Nicole Meister , Ruth Fong , Olga Russakovsky

Machine Learning-guided solutions for protein learning tasks have made significant headway in recent years. However, success in scientific discovery tasks is limited by the accessibility of well-defined and labeled in-domain data. To tackle…

Machine Learning · Computer Science 2023-01-06 Ria Vinod , Pin-Yu Chen , Payel Das