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Recent advances in applying Graph Neural Networks (GNNs) to molecular science have showcased the power of learning three-dimensional (3D) structure representations with GNNs. However, most existing GNNs suffer from the limitations of…

Biomolecules · Quantitative Biology 2023-11-21 Shuo Zhang , Yang Liu , Lei Xie

Over the past decade, Extended Reality (XR), including Virtual, Augmented, and Mixed Reality, gained attention as a research instrument in human-robot interaction studies, but remains underexplored in empirical investigations of social…

Robotics · Computer Science 2026-02-20 André Helgert , Carolin Straßmann , Sabrina C. Eimler

During the past decade, with the significant progress of computational power as well as ever-rising data availability, deep learning techniques became increasingly popular due to their excellent performance on computer vision problems. The…

Quantitative Methods · Quantitative Biology 2017-07-20 Afshine Amidi , Shervine Amidi , Dimitrios Vlachakis , Vasileios Megalooikonomou , Nikos Paragios , Evangelia I. Zacharaki

Complex biological networks are fundamental to biomedical science, capturing interactions among molecules, cells, genes, and tissues. Deciphering these networks is critical for understanding health and disease, yet their scale and…

Machine Learning · Computer Science 2025-12-09 Sakib Mostafa , Lei Xing , Md. Tauhidul Islam

This work introduces a novel Augmented Reality (AR) approach to visualize material data alongside real objects in order to facilitate detailed material analyses based on spatial non-destructive testing (NDT) data as generated in X-ray…

Human-Computer Interaction · Computer Science 2024-04-22 Alexander Gall , Anja Heim , Patrick Weinberger , Bernhard Fröhler , Johann Kastner , Christoph Heinzl

Despite substantial progress in applying neural networks (NN) to a wide variety of areas, they still largely suffer from a lack of transparency and interpretability. While recent developments in explainable artificial intelligence attempt…

Computer Vision and Pattern Recognition · Computer Science 2021-05-04 Yunhao Ge , Yao Xiao , Zhi Xu , Meng Zheng , Srikrishna Karanam , Terrence Chen , Laurent Itti , Ziyan Wu

The many variations of Implicit Neural Representations (INRs), where a neural network is trained as a continuous representation of a signal, have tremendous practical utility for downstream tasks including novel view synthesis, video…

Computer Vision and Pattern Recognition · Computer Science 2024-07-17 Namitha Padmanabhan , Matthew Gwilliam , Pulkit Kumar , Shishira R Maiya , Max Ehrlich , Abhinav Shrivastava

One of the main goals of developmental biology is to reveal the gene regulatory networks (GRNs) underlying the robust differentiation of multipotent progenitors into precisely specified cell types. Most existing methods to infer GRNs from…

Quantitative Methods · Quantitative Biology 2024-01-23 Maria Mircea , Diego Garlaschelli , Stefan Semrau

The identification of essential proteins can help in understanding the minimum requirements for cell survival and development. Network-based centrality approaches are commonly used to identify essential proteins from protein-protein…

Computational Engineering, Finance, and Science · Computer Science 2023-11-13 Li Pan , Haoyue Wang , Jing Sun , Bin Li , Bo Yang , Wenbin Li

Physics-Informed Neural Networks (PINNs) seek to solve partial differential equations (PDEs) with deep learning. Mainstream approaches that deploy fully-connected multi-layer deep learning architectures require prolonged training to achieve…

Machine Learning · Computer Science 2025-12-16 Shaghayegh Fazliani , Zachary Frangella , Madeleine Udell

Recent advancements in physics-informed neural networks (PINNs) and their variants have garnered substantial focus from researchers due to their effectiveness in solving both forward and inverse problems governed by differential equations.…

Machine Learning · Computer Science 2026-01-06 Shivani Saini , Ramesh Kumar Vats , Arup Kumar Sahoo

Understanding internal feature representations of deep neural networks (DNNs) is a fundamental step toward model interpretability. Inspired by neuroscience methods that probe biological neurons using visual stimuli, recent deep learning…

Computer Vision and Pattern Recognition · Computer Science 2025-08-12 Hongbo Zhu , Angelo Cangelosi

Heterogeneous information networks(HINs) become popular in recent years for its strong capability of modelling objects with abundant information using explicit network structure. Network embedding has been proved as an effective method to…

Machine Learning · Computer Science 2021-04-12 Xinyi Zhang , Lihui Chen

Boundary representation (B-rep) models are the standard way 3D shapes are described in Computer-Aided Design (CAD) applications. They combine lightweight parametric curves and surfaces with topological information which connects the…

We present multispectral rendering techniques for visualizing layered materials found in biological specimens. We are the first to use acquired data from the near-infrared and ultraviolet spectra for non-photorealistic rendering (NPR).…

Graphics · Computer Science 2021-09-03 Corey Toler-Franklin , Shashank Ranjan

Understanding the physical structure is essential for real-world applications such as embodied agents, interactive design, and long-horizon manipulation. Yet, prevailing Vision-Language Model (VLM) evaluations still center on…

Computer Vision and Pattern Recognition · Computer Science 2026-02-25 Yuhao Wu , Maojia Song , Yihuai Lan , Lei Wang , Zhiqiang Hu , Yao Xiao , Heng Zhou , Weihua Zheng , Dylan Raharja , Soujanya Poria , Roy Ka-Wei Lee

Developing robust multi-modal feature representations is crucial for enhancing object tracking performance. In pursuit of this objective, a novel X Modality Assisting Network (X-Net) is introduced, which explores the impact of the fusion…

Computer Vision and Pattern Recognition · Computer Science 2025-02-25 Zhaisheng Ding , Haiyan Li , Ruichao Hou , Yanyu Liu , Shidong Xie

Physics-Informed Neural Networks (PINNs) are fast becoming an important tool to solve differential equations rapidly and accurately, and to identify the systems parameters that best agree with a given set of measurements. PINNs have been…

Recent advances in deep neuroevolution have demonstrated that evolutionary algorithms, such as evolution strategies (ES) and genetic algorithms (GA), can scale to train deep neural networks to solve difficult reinforcement learning (RL)…

Neural and Evolutionary Computing · Computer Science 2018-05-04 Rui Wang , Jeff Clune , Kenneth O. Stanley

Deep learning is increasingly used in decision-making tasks. However, understanding how neural networks produce final predictions remains a fundamental challenge. Existing work on interpreting neural network predictions for images often…

Human-Computer Interaction · Computer Science 2019-09-04 Fred Hohman , Haekyu Park , Caleb Robinson , Duen Horng Chau