Related papers: Fast solutions to k-parity and k-synchronisation u…
Given a clique-width $k$-expression of a graph $G$, we provide $2^{O(k)}\cdot n$ time algorithms for connectivity constraints on locally checkable properties such as Node-Weighted Steiner Tree, Connected Dominating Set, or Connected Vertex…
Counting k-cliques in a graph is an important problem in graph analysis with many applications such as community detection and graph partitioning. Counting k-cliques is typically done by traversing search trees starting at each vertex in…
Listing dense subgraphs in large graphs plays a key task in varieties of network analysis applications like community detection. Clique, as the densest model, has been widely investigated. However, in practice, communities rarely form as…
Given a set of k networks, possibly with different sizes and no overlaps in nodes or edges, how can we quickly assess similarity between them, without solving the node-correspondence problem? Analogously, how can we extract a small number…
The $k$-mappability problem has two integers parameters $m$ and $k$. For every subword of size $m$ in a text $S$, we wish to report the number of indices in $S$ in which the word occurs with at most $k$ mismatches. The problem was lately…
We develop an algorithm that finds the consensus of many different clustering solutions of a graph. We formulate the problem as a median set partitioning problem and propose a greedy optimization technique. Unlike other approaches that find…
We propose a fast, parallel maximum clique algorithm for large sparse graphs that is designed to exploit characteristics of social and information networks. The method exhibits a roughly linear runtime scaling over real-world networks…
Finding all maximal $k$-plexes on networks is a fundamental research problem in graph analysis due to many important applications, such as community detection, biological graph analysis, and so on. A $k$-plex is a subgraph in which every…
There are existing standard solvers for tackling discrete optimization problems. However, in practice, it is uncommon to apply them directly to the large input space typical of this class of problems. Rather, the input is preprocessed to…
A graph is inductive $k$-independent if there exists and ordering of its vertices $v_{1},...,v_{n}$ such that $\alpha(G[N(v_{i})\cap V_{i}])\leq k $ where $N(v_{i})$ is the neighborhood of $v_{i}$, $V_{i}=\{v_{i},...,v_{n}\}$ and $\alpha$…
The random K-satisfiability (K-SAT) problem is an important problem for studying typical-case complexity of NP-complete combinatorial satisfaction; it is also a representative model of finite-connectivity spin-glasses. In this paper we…
A clique in a graph is a set of vertices, each of which is adjacent to every other vertex in this set. A k-clique relaxes this requirement, requiring vertices to be within a distance k of each other, rather than directly adjacent. In…
We solve the subgraph isomorphism problem in planar graphs in linear time, for any pattern of constant size. Our results are based on a technique of partitioning the planar graph into pieces of small tree-width, and applying dynamic…
In the computational-mechanics structural analysis of one-dimensional cellular automata the following automata-theoretic analogue of the \emph{change-point problem} from time series analysis arises: \emph{Given a string $\sigma$ and a…
While finding a path between two nodes is the basis for several applications, the need for alternative paths also may have various motivations. For instance, this can be of interest for ensuring reliability in a telecommunications network,…
The problem of scheduling jobs on parallel machines (identical, uniform, or unrelated), under incompatibility relation modeled as a block graph, under the makespan optimality criterion, is considered in this paper. No two jobs that are in…
We describe a linear-time algorithm that finds a planar drawing of every graph of a simple line or pseudoline arrangement within a grid of area O(n^{7/6}). No known input causes our algorithm to use area \Omega(n^{1+\epsilon}) for any…
Let ${\mathcal C}$ be a proper minor-closed family of graphs. We present a randomized algorithm that given a graph $G \in {\mathcal C}$ with $n$ vertices, finds a simple cycle of size $k$ in $G$ (if exists) in $2^{O(k)}n$ time. The…
Our work concerns algorithms for an unweighted variant of Maximum Flow. In the All-Pairs Connectivity (APC) problem, we are given a graph $G$ on $n$ vertices and $m$ edges, and are tasked with computing the maximum number of edge-disjoint…
A family of comparison-based exact pattern matching algorithms is described. They utilize multi-dimensional arrays in order to process more than one adjacent text window in each iteration of the search cycle. This approach leads to a lower…