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Standard methods for multi-label text classification largely rely on encoder-only pre-trained language models, whereas encoder-decoder models have proven more effective in other classification tasks. In this study, we compare four methods…

Computation and Language · Computer Science 2023-05-10 Yova Kementchedjhieva , Ilias Chalkidis

Coding morbidity data using international standard diagnostic classifications is increasingly important and still challenging. Clinical coders and physicians assign codes to patient episodes based on their interpretation of case notes or…

Other Computer Science · Computer Science 2025-03-10 Elena Cardillo , Lucilla Frattura

Biomedical text tagging systems are plagued by the dearth of labeled training data. There have been recent attempts at using pre-trained encoders to deal with this issue. Pre-trained encoder provides representation of the input text which…

Computation and Language · Computer Science 2020-01-16 Gaurav Singh , Zahra Sabet , John Shawe-Taylor , James Thomas

Prediction of medical codes from clinical notes is both a practical and essential need for every healthcare delivery organization within current medical systems. Automating annotation will save significant time and excessive effort spent by…

Computation and Language · Computer Science 2021-07-23 Byung-Hak Kim , Varun Ganapathi

In a setting where segmentation models have to be built for multiple datasets, each with its own corresponding label set, a straightforward way is to learn one model for every dataset and its labels. Alternatively, multi-task architectures…

Computer Vision and Pattern Recognition · Computer Science 2024-11-19 Deepa Anand , Bipul Das , Vyshnav Dangeti , Antony Jerald , Rakesh Mullick , Uday Patil , Pakhi Sharma , Prasad Sudhakar

Dataless text classification is capable of classifying documents into previously unseen labels by assigning a score to any document paired with a label description. While promising, it crucially relies on accurate descriptions of the label…

Computation and Language · Computer Science 2020-12-09 Zewei Chu , Karl Stratos , Kevin Gimpel

Interpretability is highly desired for deep neural network-based classifiers, especially when addressing high-stake decisions in medical imaging. Commonly used post-hoc interpretability methods have the limitation that they can produce…

Image and Video Processing · Electrical Eng. & Systems 2024-01-04 Sourya Sengupta , Mark A. Anastasio

Although machine learning has become a powerful tool to augment doctors in clinical analysis, the immense amount of labeled data that is necessary to train supervised learning approaches burdens each development task as time and resource…

As clinical data are becoming increasingly available, machine learning methods have been employed to extract knowledge from them and predict clinical events. While promising, approaches suffer from at least two main issues: low availability…

Automated data labeling techniques are crucial for accelerating the development of deep learning models, particularly in complex medical imaging applications. However, ensuring accuracy and efficiency remains challenging. This paper…

Computer Vision and Pattern Recognition · Computer Science 2024-04-09 Yu-Hsi Chen

Predicting the judgment of a legal case from its unannotated case facts is a challenging task. The lengthy and non-uniform document structure poses an even greater challenge in extracting information for decision prediction. In this work,…

Computation and Language · Computer Science 2023-11-15 Nishchal Prasad , Mohand Boughanem , Taoufiq Dkaki

Word embeddings are effective intermediate representations for capturing semantic regularities between words, when learning the representations of text sequences. We propose to view text classification as a label-word joint embedding…

Computation and Language · Computer Science 2018-05-14 Guoyin Wang , Chunyuan Li , Wenlin Wang , Yizhe Zhang , Dinghan Shen , Xinyuan Zhang , Ricardo Henao , Lawrence Carin

An increasing number of public datasets have shown a marked impact on automated organ segmentation and tumor detection. However, due to the small size and partially labeled problem of each dataset, as well as a limited investigation of…

Image and Video Processing · Electrical Eng. & Systems 2024-06-27 Jie Liu , Yixiao Zhang , Jie-Neng Chen , Junfei Xiao , Yongyi Lu , Bennett A. Landman , Yixuan Yuan , Alan Yuille , Yucheng Tang , Zongwei Zhou

We show how to learn low-dimensional representations (embeddings) of patient visits from the corresponding electronic health record (EHR) where International Classification of Diseases (ICD) diagnosis codes are removed. We expect that these…

Computers and Society · Computer Science 2018-03-28 Jean-Baptiste Escudié , Alaa Saade , Alice Coucke , Marc Lelarge

Deep convolutional neural networks have achieved remarkable progress on a variety of medical image computing tasks. A common problem when applying supervised deep learning methods to medical images is the lack of labeled data, which is very…

Computer Vision and Pattern Recognition · Computer Science 2020-05-12 Xiaomeng Li , Lequan Yu , Hao Chen , Chi-Wing Fu , Lei Xing , Pheng-Ann Heng

Automatic text classification (TC) research can be used for real-world problems such as the classification of in-patient discharge summaries and medical text reports, which is beneficial to make medical documents more understandable to…

Computation and Language · Computer Science 2018-12-06 Ying Shen , Qiang Zhang , Jin Zhang , Jiyue Huang , Yuming Lu , Kai Lei

The massive scale and growth of textual biomedical data have made its indexing and classification increasingly important. However, existing research on this topic mainly utilized convolutional and recurrent neural networks, which generally…

Computation and Language · Computer Science 2022-03-08 Bruce Nguyen , Shaoxiong Ji

Pre-trained vision-language models like CLIP have recently shown superior performances on various downstream tasks, including image classification and segmentation. However, in fine-grained image re-identification (ReID), the labels are…

Computer Vision and Pattern Recognition · Computer Science 2023-01-03 Siyuan Li , Li Sun , Qingli Li

Medical image segmentation is one of the fundamental problems for artificial intelligence-based clinical decision systems. Current automatic medical image segmentation methods are often failed to meet clinical requirements. As such, a…

Computer Vision and Pattern Recognition · Computer Science 2021-11-16 Wenhao Li , Qisen Xu , Chuyun Shen , Bin Hu , Fengping Zhu , Yuxin Li , Bo Jin , Xiangfeng Wang

Unsupervised pretraining is an integral part of many natural language processing systems, and transfer learning with language models has achieved remarkable results in many downstream tasks. In the clinical application of medical code…

Computation and Language · Computer Science 2022-06-03 Shaoxiong Ji , Matti Hölttä , Pekka Marttinen