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Range migrations in response to climate change, invasive species and the emergence of novel ecosystems highlight the importance of temporal turnover in community composition as a fundamental part of global change in the Anthropocene.…

Quantitative Methods · Quantitative Biology 2016-04-25 Hideyasu Shimadzu , Maria Dornelas , Anne E. Magurran

Animal collective behavior is often modeled with self-propelled particles, assuming each individual has ``omniscient'' knowledge of its neighbors. Yet, neighbors may be hidden from view and we do not know the effect of this information…

Biological Physics · Physics 2024-03-20 Diego Castro , Franck Ruffier , Christophe Eloy

Social interaction increases significantly the performance of a wide range of cooperative systems. However, evidence that natural swarms limit the number of social connections suggests potentially detrimental consequences of excessive…

Adaptation and Self-Organizing Systems · Physics 2016-09-09 David Mateo , Yoke Kong Kuan , Roland Bouffanais

Popular hypotheses about the origins of collective adaptation are related to two basic behaviours: protection from predators and a combined search for food resources. Among the anti-predator explanations, the predator confusion hypothesis…

Multiagent Systems · Computer Science 2022-09-15 Georgi Ivanov , George Palamas

How do flocks, herds and swarms proceed through disordered environments? This question is not only crucial to animal groups in the wild, but also to virtually all applications of collective robotics, and active materials composed of…

Soft Condensed Matter · Physics 2016-10-17 Alexandre Morin , Nicolas Desreumaux , Jean-Baptiste Caussin , Denis Bartolo

Collective motion is a phenomenon observed across length scales in nature, from bacterial swarming and tissue migration to the flocking of animals. The mechanisms underlying this behavior vary significantly depending on the biological…

Soft Condensed Matter · Physics 2025-01-15 Urvi Mahendra Bora , Mohd Suhail Rizvi

This study builds upon our previously proposed stochastic differential equation (SDE)-based model to further investigate fish school fragmentation under predation. Specifically, we explore structural dynamics by incorporating…

Quantitative Methods · Quantitative Biology 2025-08-05 Junyi Qi , Thorkil Casse , Masayoshi Harada , Linh Thi Hoai Nguyen , Ton Viet Ta

We examine the stability of the "coast" motion of fish, that is to say, the motion of a neutrally buoyant fish at constant speed in a straight line. The forces and moments acting on the fish body are thus perfectly balanced. The fish motion…

Fluid Dynamics · Physics 2013-07-01 Fangxu Jing , Eva Kanso

Understanding the organization of collective motion in biological systems is an ongoing challenge. In this Paper we consider a minimal model of self-propelled particles with variable speed. Inspired by experimental data from schooling fish,…

Biological Physics · Physics 2015-06-04 Shradha Mishra , Kolbjørn Tunstrøm , Iain D. Couzin , Cristián Huepe

From the formation of ice in small clusters of water molecules to the mass raids of army ant colonies, the emergent behavior of collectives depends critically on their size. At the same time, common wisdom holds that such behaviors are…

Populations and Evolution · Quantitative Biology 2025-10-08 Jacob Calvert , Andréa W. Richa , Dana Randall

Marine microorganisms must cope with complex flow patterns and even turbulence as they navigate the ocean. To survive they must avoid predation and find efficient energy sources. A major difficulty in analysing possible survival strategies…

Fluid Dynamics · Physics 2022-11-29 J. Qiu , N. Mousavi , K. Gustavsson , C. Xu , B. Mehlig , L. Zhao

Homophily, the tendency of individuals to associate with others who share similar traits, has been identified as a major driving force in the formation and evolution of social ties. In many cases, it is not clear if homophily is the result…

Physics and Society · Physics 2017-09-01 Ivan Smirnov , Stefan Thurner

Microorganisms often encounter strong confinement and complex hydrodynamic flows while navigating their habitats. Combining finite-element methods and stochastic simulations, we study the interplay of active transport and heterogeneous…

Soft Condensed Matter · Physics 2025-11-05 Pallabi Das , Mirko Residori , Axel Voigt , Suvendu Mandal , Christina Kurzthaler

Bird flocking is a striking example of collective animal behaviour. A vivid illustration of this phenomenon is provided by the aerial display of vast flocks of starlings gathering at dusk over the roost and swirling with extraordinary…

Interactions in natural communities can be highly heterogeneous, with any given species interacting appreciably with only some of the others, a situation commonly represented by sparse interaction networks. We study the consequences of…

Populations and Evolution · Quantitative Biology 2022-10-12 Stav Marcus , Ari M. Turner , Guy Bunin

The emergence of collective decision in swarms and their coordinated response to complex environments underscore the central role played by social transmission of information. Here, the different possible origins of information flow…

Adaptation and Self-Organizing Systems · Physics 2017-05-23 Mohammad Komareji , Yilun Shang , Roland Bouffanais

We propose a new model in order to study behaviors of self-organized system such as a group of animals. We assume that the individuals have two degrees of freedom corresponding one to their internal state and the other to their external…

Biological Physics · Physics 2015-10-23 P. The Nguyen , V. Thanh Ngo , H. T. Diep

Schooling fish exhibit giant rotating clusters such as balls, tori, and rings, among other collective patterns. In order to account for their giantness and flexible shape change, we introduce an agent-based model that limits the number of…

Adaptation and Self-Organizing Systems · Physics 2022-06-02 Susumu Ito , Nariya Uchida

The journey of mammalian spermatozoa in nature is well-known to be reliant on their individual motility. Often swimming in crowded microenvironments, the progress of any single swimmer is likely dependent on their interactions with other…

Fluid Dynamics · Physics 2019-09-11 Benjamin J. Walker , Kenta Ishimoto , Eamonn A. Gaffney

We computationally studied the pair interactions and collective behavior of asymmetric, dumbbell swimmers over a range of intermediate Reynolds numbers and initial configurations. Depending on the initial positions and the Re, we found that…

Fluid Dynamics · Physics 2021-04-22 Thomas Dombrowski , Hong Nguyen , Daphne Klotsa