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Related papers: Are Sounds Sound for Phylogenetic Reconstruction?

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We evaluate the performance of state-of-the-art algorithms for automatic cognate detection by comparing how useful automatically inferred cognates are for the task of phylogenetic inference compared to classical manually annotated cognate…

Computation and Language · Computer Science 2018-04-17 Taraka Rama , Johann-Mattis List , Johannes Wahle , Gerhard Jäger

Sound correspondence patterns form the basis of cognate detection and phonological reconstruction in historical language comparison. Methods for the automatic inference of correspondence patterns from phonetically aligned cognate sets have…

Computation and Language · Computer Science 2025-12-09 Frederic Blum , Johann-Mattis List

Computational approaches in historical linguistics have been increasingly applied during the past decade and many new methods that implement parts of the traditional comparative method have been proposed. Despite these increased efforts,…

Computation and Language · Computer Science 2022-04-12 Johann-Mattis List , Robert Forkel , Nathan W. Hill

Historical linguistics aims at inferring the most likely language phylogenetic tree starting from information concerning the evolutionary relatedness of languages. The available information are typically lists of homologous (lexical,…

Physics and Society · Physics 2015-05-27 Simone Pompei , Vittorio Loreto , Francesca Tria

We describe a set of new methods to partially automate linguistic phylogenetic inference given (1) cognate sets with their respective protoforms and sound laws, (2) a mapping from phones to their articulatory features and (3) a typological…

Computation and Language · Computer Science 2024-02-05 Kalvin Chang , Nathaniel R. Robinson , Anna Cai , Ting Chen , Annie Zhang , David R. Mortensen

Automatic phylogenetic inference plays an increasingly important role in computational historical linguistics. Most pertinent work is currently based on expert cognate judgments. This limits the scope of this approach to a small number of…

Computation and Language · Computer Science 2018-10-18 Gerhard Jäger

To fully exploit the potential of computational phylogenetic methods for cognate data one needs to leverage specific (complex) models an machine learning-based techniques. However, both approaches require datasets that are substantially…

Computation and Language · Computer Science 2025-07-02 Luise Häuser , Alexandros Stamatakis

Identification of cognates across related languages is one of the primary problems in historical linguistics. Automated cognate identification is helpful for several downstream tasks including identifying sound correspondences,…

Computation and Language · Computer Science 2024-02-07 V. S. D. S. Mahesh Akavarapu , Arnab Bhattacharya

Computational approaches to historical linguistics have been proposed since half a century. Within the last decade, this line of research has received a major boost, owing both to the transfer of ideas and software from computational…

Computation and Language · Computer Science 2018-05-22 Gerhard Jäger

In this paper, we describe the problem of cognate identification and its relation to phylogenetic inference. We introduce subsequence based features for discriminating cognates from non-cognates. We show that subsequence based features…

Computation and Language · Computer Science 2014-08-25 Taraka Rama

Phylogenetic methods have broad potential in linguistics beyond tree inference. Here, we show how a phylogenetic approach opens the possibility of gaining historical insights from entirely new kinds of linguistic data--in this instance,…

Computation and Language · Computer Science 2021-05-10 Jayden L. Macklin-Cordes , Claire Bowern , Erich R. Round

Computational phylogenetics has become an established tool in historical linguistics, with many language families now analyzed using likelihood-based inference. However, standard approaches rely on expert-annotated cognate sets, which are…

Computation and Language · Computer Science 2026-03-30 Gerhard Jäger

In this paper we examine the usefulness of two classes of algorithms Distance Methods, Discrete Character Methods (Felsenstein and Felsenstein 2003) widely used in genetics, for predicting the family relationships among a set of related…

Computation and Language · Computer Science 2014-01-06 Taraka Rama , Sudheer Kolachina , Lakshmi Bai B

Phylogenetic reconstruction aims at finding plausible hypotheses of the evolutionary history of genes or species based on genomic sequence information. The distinction of orthologous genes (genes that having a common ancestry and diverged…

Populations and Evolution · Quantitative Biology 2016-02-29 Marc Hellmuth , Nicolas Wieseke

Ranking functions in information retrieval are often used in search engines to recommend the relevant answers to the query. This paper makes use of this notion of information retrieval and applies onto the problem domain of cognate…

Information Retrieval · Computer Science 2018-11-21 Pranav A

Phonological reconstruction is one of the central problems in historical linguistics where a proto-word of an ancestral language is determined from the observed cognate words of daughter languages. Computational approaches to historical…

Computation and Language · Computer Science 2023-12-27 V. S. D. S. Mahesh Akavarapu , Arnab Bhattacharya

Historical linguists have identified regularities in the process of historic sound change. The comparative method utilizes those regularities to reconstruct proto-words based on observed forms in daughter languages. Can this process be…

Computation and Language · Computer Science 2021-05-11 Carlo Meloni , Shauli Ravfogel , Yoav Goldberg

Quartet Reconstruction, the task of recovering a phylogenetic tree from smaller trees on four species called \textit{quartets}, is a well-studied problem in theoretical computer science with far-reaching connections to statistics, graph…

Data Structures and Algorithms · Computer Science 2026-04-21 Dionysis Arvanitakis , Vaggos Chatziafratis , Yiyuan Luo , Konstantin Makarychev

We propose a model of the evolution of a matrix along a phylogenetic tree, in which transformations affect either entire rows or columns of the matrix. This represents the change of both lexical and phonological aspects of linguistic data,…

Populations and Evolution · Quantitative Biology 2022-06-28 Grégoire Clarté , Robin J. Ryder

In historical linguistics, the affiliation of languages to a common language family is traditionally carried out using a complex workflow that relies on manually comparing individual languages. Large-scale standardized collections of…

Computation and Language · Computer Science 2025-12-09 Frederic Blum , Steffen Herbold , Johann-Mattis List
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