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Gaussian graphical models provide a powerful framework to reveal the conditional dependency structure between multivariate variables. The process of uncovering the conditional dependency network is known as structure learning. Bayesian…

Methodology · Statistics 2024-07-30 Lucas Vogels , Reza Mohammadi , Marit Schoonhoven , S. Ilker Birbil

A learning-based posterior distribution estimation method, Probabilistic Dipole Inversion (PDI), is proposed to solve quantitative susceptibility mapping (QSM) inverse problem in MRI with uncertainty estimation. A deep convolutional neural…

Image and Video Processing · Electrical Eng. & Systems 2020-04-28 Jinwei Zhang , Hang Zhang , Mert Sabuncu , Pascal Spincemaille , Thanh Nguyen , Yi Wang

We study random graph models for directed acyclic graphs, an important class of networks that includes citation networks, food webs, and feed-forward neural networks among others. We propose two specific models, roughly analogous to the…

Physics and Society · Physics 2009-10-16 Brian Karrer , M. E. J. Newman

We address the problem of learning the topology of directed acyclic graphs (DAGs) from nodal observations, which adhere to a linear structural equation model. Recent advances framed the combinatorial DAG structure learning task as a…

Machine Learning · Computer Science 2024-09-13 Samuel Rey , Seyed Saman Saboksayr , Gonzalo Mateos

We establish finite-sample guarantees for a polynomial-time algorithm for learning a nonlinear, nonparametric directed acyclic graphical (DAG) model from data. The analysis is model-free and does not assume linearity, additivity,…

Machine Learning · Statistics 2020-11-12 Ming Gao , Yi Ding , Bryon Aragam

Transformer models have recently gained popularity in graph representation learning as they have the potential to learn complex relationships beyond the ones captured by regular graph neural networks. The main research question is how to…

Machine Learning · Computer Science 2023-10-31 Yuankai Luo , Veronika Thost , Lei Shi

Graphs arise across diverse domains, from biology and chemistry to social and information networks, as well as in transportation and logistics. Inference on graph-structured data requires methods that are permutation-invariant, scalable…

Machine Learning · Statistics 2026-05-05 Svenja Jedhoff , Elizaveta Semenova , Aura Raulo , Anne Meyer , Paul-Christian Bürkner

The displayed tree phylogenetic network model is shown to sit as a natural submodel of the graphical model associated to a directed acyclic graph (DAG). This representation allows to derive a number of results about the displayed tree…

Populations and Evolution · Quantitative Biology 2025-08-01 Seth Sullivant

Existing score-based methods for directed acyclic graph (DAG) learning from observational data struggle to recover the causal graph accurately and sample-efficiently. To overcome this, in this study, we propose DrBO (DAG recovery via…

Machine Learning · Computer Science 2025-01-28 Bao Duong , Sunil Gupta , Thin Nguyen

The number of artificial intelligence algorithms for learning causal models from data is growing rapidly. Most ``causal discovery'' or ``causal structure learning'' algorithms are primarily validated through simulation studies. However, no…

Methodology · Statistics 2024-05-24 Bryan Andrews , Erich Kummerfeld

This article surveys the variety of ways in which a directed acyclic graph (DAG) can be used to represent a problem of probabilistic causality. For each of these we describe the relevant formal or informal semantics governing that…

Statistics Theory · Mathematics 2024-02-16 Philip Dawid

Faithfulness is the foundation of probability distribution and graph in causal discovery and causal inference. In this paper, several unfaithful probability distribution examples are constructed in three--vertices binary causality directed…

Machine Learning · Statistics 2025-01-31 Jingwei Liu

In variational inference, the benefits of Bayesian models rely on accurately capturing the true posterior distribution. We propose using neural samplers that specify implicit distributions, which are well-suited for approximating complex…

Machine Learning · Computer Science 2023-11-10 Anshuk Uppal , Kristoffer Stensbo-Smidt , Wouter Boomsma , Jes Frellsen

We analyze a new property of directed acyclic graphs (DAGs), called layerwidth, arising from a class of DAGs proposed by Eiter and Lukasiewicz. This class of DAGs permits certain problems of structural model-based causality and explanation…

Data Structures and Algorithms · Computer Science 2012-12-12 Mark Hopkins

Discovering causal structures from data is a challenging inference problem of fundamental importance in all areas of science. The appealing properties of neural networks have recently led to a surge of interest in differentiable neural…

Causal inference methods for observational data are increasingly recognized as a valuable complement to randomized clinical trials (RCTs). They can, under strong assumptions, emulate RCTs or help refine their focus. Our approach to causal…

Methodology · Statistics 2024-08-14 Carlo Berzuini , Davide Luciani , Hiren C. Patel

A Bayesian network is a probabilistic graphical model that consists of a directed acyclic graph (DAG), where each node is a random variable and attached to each node is a conditional probability distribution (CPD). A Bayesian network can be…

Machine Learning · Computer Science 2020-11-04 Charupriya Sharma , Zhenyu A. Liao , James Cussens , Peter van Beek

Gaussian graphical models are a popular tool to learn the dependence structure in the form of a graph among variables of interest. Bayesian methods have gained in popularity in the last two decades due to their ability to simultaneously…

Statistics Theory · Mathematics 2019-04-02 Yabo Niu , Debdeep Pati , Bani Mallick

Some temporal networks, most notably citation networks, are naturally represented as directed acyclic graphs (DAGs). To detect communities in DAGs, we propose a modularity for DAGs by defining an appropriate null model (i.e., randomized…

Physics and Society · Physics 2015-08-13 Leo Speidel , Taro Takaguchi , Naoki Masuda

A directed acyclic graph (DAG) partially represents the conditional independence structure among observations of a system if the local Markov condition holds, that is, if every variable is independent of its non-descendants given its…

Information Theory · Computer Science 2010-10-28 Bastian Steudel , Nihat Ay
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