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The chemical master equation (CME) is frequently used in systems biology to quantify the effects of stochastic fluctuations that arise due to biomolecular species with low copy numbers. The CME is a system of ordinary differential equations…

Quantitative Methods · Quantitative Biology 2017-10-25 Ankit Gupta , Jan Mikelson , Mustafa Khammash

The Lindblad master equation is a fundamental tool for describing the evolution of open quantum systems, but its computational complexity poses a significant challenge, especially for large systems. This article introduces a stochastic…

Quantum Physics · Physics 2025-04-04 Sayak Adhikari , Roi Baer

Spin squeezing inequalities (SSI) represent a major tool to probe quantum entanglement among a collection of few-level atoms, and are based on collective spin measurements and their fluctuations. Yet, for atomic ensembles of spin-$j$ atoms…

Quantum Gases · Physics 2023-01-03 Guillem Müller-Rigat , Maciej Lewenstein , Irénée Frérot

Quantum spin systems with strong geometric restrictions give rise to rich quantum phases such as valence bond solids and spin liquid states. However, the geometric restrictions often hamper the application of sophisticated numerical…

Statistical Mechanics · Physics 2019-05-01 Zheng Yan , Yongzheng Wu , Chenrong Liu , Olav F. Syljuåsen , Jie Lou , Yan Chen

The interaction between matter and squeezed light has mostly been treated within the approximation that the field correlation time is small. Methods for treating squeezed light with more general correlations currently involve explicitly…

Quantum Physics · Physics 2022-03-15 Jonathan A. Gross , Ben Baragiola , T. M. Stace , Joshua Combes

Many-particle entanglement is a fundamental concept of quantum physics that still presents conceptual challenges. While spin-squeezed and other nonclassical states of atomic ensembles were used to enhance measurement precision in quantum…

Quantum Physics · Physics 2018-11-09 Matteo Fadel , Tilman Zibold , Boris Décamps , Philipp Treutlein

We propose an approach based on stochastic differential equations to describe superfluorescence in compact ensembles of multi-level emitters in the presence of various incoherent processes. This approach has a numerical complexity that does…

Quantum Physics · Physics 2024-09-05 Stasis Chuchurka , Vladislav Sukharnikov , Andrei Benediktovitch , Nina Rohringer

The chemical master equation (CME), which describes the discrete and stochastic molecule number dynamics associated with biological processes like transcription, is difficult to solve analytically. It is particularly hard to solve for…

Subcellular Processes · Quantitative Biology 2021-03-23 John J. Vastola , Gennady Gorin , Lior Pachter , William R. Holmes

The use of approximate solution techniques for the Chemical Master Equation is common practice for the analysis of stochastic chemical systems. Despite their widespread use, however, many such techniques rely on unverifiable assumptions and…

Chemical Physics · Physics 2021-05-11 Flemming Holtorf , Paul I. Barton

The totally asymmetric simple exclusion process (TASEP) is a stochastic model for the unidirectional dynamics of interacting particles on a $1$D-lattice that is much used in systems biology and statistical physics. Its master equation…

Statistical Mechanics · Physics 2024-08-01 Kilian Pioch , Thomas Kriecherbauer , Michael Margaliot , Lars Grüne

The evolution of a continuous time Markov process with a finite number of states is usually calculated by the Master equation - a linear differential equations with a singular generator matrix. We derive a general method for reducing the…

Quantitative Methods · Quantitative Biology 2012-07-19 Daniel Soudry , Ron Meir

The set of continuous norm-preserving stochastic Schrodinger equations associated with the Lindblad master equation is introduced. This set is used to describe the localization properties of the state vector toward eigenstates of the…

Quantum Physics · Physics 2008-11-26 M. Rigo , F. Mota-Furtado , P. F. O'Mahony

A systematic procedure for deriving the master equation of a dissipative system is reported in the framework of stochastic description. For the Caldeira-Leggett model of the harmonic-oscillator bath, a detailed and elementary derivation of…

Quantum Physics · Physics 2015-05-30 Haifeng Li , Jiushu Shao , Shikuan Wang

We predict that exploiting spin-orbit coupling in a harmonically trapped spinor quantum gas can lead to scaling of the optimal measurement precision beyond the Heisenberg scaling. We show that quadratic scaling with the number of atoms can…

Quantum Physics · Physics 2023-03-15 Karol Gietka , Helmut Ritsch

We reconsider the one-axis twisting Hamiltonian, which is commonly used for generating spin squeezing, and treat its dynamics within the Heisenberg operator approach. To this end we solve the underlying Heisenberg equations of motion…

Quantum Gases · Physics 2018-01-17 Aranya B. Bhattacherjee , Deepti Sharma , Axel Pelster

We study a general class of singular degenerate parabolic stochastic partial differential equations (SPDEs) which include, in particular, the stochastic porous medium equations and the stochastic fast diffusion equation. We propose a fully…

Numerical Analysis · Mathematics 2020-12-23 Ľubomír Baňas , Benjamin Gess , Christian Vieth

The aim of this work is to provide the strong convergence results of numerical approximations of a general second order non-autonomous semilinear stochastic partial differential equation (SPDE) driven simultaneously by an additive…

Numerical Analysis · Mathematics 2024-09-11 Aurelien Junior Noupelah , Jean Daniel Mukam , Antoine Tambue

The Morse potential one-dimensional quantum system is a realistic model for studying vibrations of atoms in a diatomic molecule. This system is very close to the harmonic oscillator one. We thus propose a construction of squeezed coherent…

Mathematical Physics · Physics 2015-06-03 M. Angelova , A. Hertz , V. Hussin

We determine the complete set of generalized spin squeezing inequalities. These are entanglement criteria that can be used for the experimental detection of entanglement in a system of spin-1/2 particles in which the spins cannot be…

Quantum Physics · Physics 2011-11-09 Geza Toth , Christian Knapp , Otfried Gühne , Hans J. Briegel

Numerical exact diagonalization is the ultimate method of choice in order to discuss static, dynamic, and thermodynamic properties of quantum systems. In this article we consider Heisenberg spin-systems and extend the range of applicability…

Strongly Correlated Electrons · Physics 2009-10-08 R. Schnalle , J. Schnack