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In practice, many medical datasets have an underlying taxonomy defined over the disease label space. However, existing classification algorithms for medical diagnoses often assume semantically independent labels. In this study, we aim to…

Computer Vision and Pattern Recognition · Computer Science 2022-09-14 Zhen Yu , Toan Nguyen , Yaniv Gal , Lie Ju , Shekhar S. Chandra , Lei Zhang , Paul Bonnington , Victoria Mar , Zhiyong Wang , Zongyuan Ge

Representing graphs as sets of node embeddings in certain curved Riemannian manifolds has recently gained momentum in machine learning due to their desirable geometric inductive biases, e.g., hierarchical structures benefit from hyperbolic…

Machine Learning · Computer Science 2020-06-09 Calin Cruceru , Gary Bécigneul , Octavian-Eugen Ganea

The problem of identifying geometric structure in heterogeneous, high-dimensional data is a cornerstone of representation learning. While there exists a large body of literature on the embeddability of canonical graphs, such as lattices or…

Machine Learning · Computer Science 2019-10-15 Melanie Weber

Knowledge graph embeddings (KGE) have been validated as powerful methods for inferring missing links in knowledge graphs (KGs) that they typically map entities into Euclidean space and treat relations as transformations of entities.…

Machine Learning · Computer Science 2024-02-26 Wenjie Zheng , Wenxue Wang , Shu Zhao , Fulan Qian

The arrangement of network nodes in hyperbolic spaces has become a widely studied problem, motivated by numerous results suggesting the existence of hidden metric spaces behind the structure of complex networks. Although several methods…

Physics and Society · Physics 2023-02-06 Bianka Kovács , Gergely Palla

Current approaches to genomic sequence modeling often struggle to align the inductive biases of machine learning models with the evolutionarily-informed structure of biological systems. To this end, we formulate a novel application of…

Machine Learning · Computer Science 2025-07-30 Raiyan R. Khan , Philippe Chlenski , Itsik Pe'er

Finding meaningful representations and distances of hierarchical data is important in many fields. This paper presents a new method for hierarchical data embedding and distance. Our method relies on combining diffusion geometry, a central…

Machine Learning · Computer Science 2023-05-31 Ya-Wei Eileen Lin , Ronald R. Coifman , Gal Mishne , Ronen Talmon

Heterogeneous graphs have attracted a lot of research interests recently due to the success for representing complex real-world systems. However, existing methods have two pain points in embedding them into low-dimensional spaces: the…

Machine Learning · Computer Science 2024-06-18 Qijie Bai , Changli Nie , Haiwei Zhang , Zhicheng Dou , Xiaojie Yuan

A hyperbolic space has been shown to be more capable of modeling complex networks than a Euclidean space. This paper proposes an explicit update rule along geodesics in a hyperbolic space. The convergence of our algorithm is theoretically…

Machine Learning · Statistics 2018-05-29 Yosuke Enokida , Atsushi Suzuki , Kenji Yamanishi

It is now a standard for neural network representations to be trained on large, publicly available datasets, and used for new problems. The reasons for why neural network representations have been so successful for transfer, however, are…

Machine Learning · Computer Science 2022-09-20 Ehsan Imani , Wei Hu , Martha White

Learning unbiased node representations for imbalanced samples in the graph has become a more remarkable and important topic. For the graph, a significant challenge is that the topological properties of the nodes (e.g., locations, roles) are…

Machine Learning · Computer Science 2023-04-12 Xingcheng Fu , Yuecen Wei , Qingyun Sun , Haonan Yuan , Jia Wu , Hao Peng , Jianxin Li

3D-aware visual pretraining has proven effective in improving the performance of downstream robotic manipulation tasks. However, existing methods are constrained to Euclidean embedding spaces, whose flat geometry limits their ability to…

Robotics · Computer Science 2026-03-13 Jin Yang , Ping Wei , Yixin Chen , Nanning Zheng

Learning faithful graph representations as sets of vertex embeddings has become a fundamental intermediary step in a wide range of machine learning applications. The quality of the embeddings is usually determined by how well the geometry…

Machine Learning · Computer Science 2021-05-13 Federico López , Beatrice Pozzetti , Steve Trettel , Anna Wienhard

Hyperbolic representation learning has been widely used to extract implicit hierarchies within data, and recently it has found its way to the open-world classification task of Generalized Category Discovery (GCD). However, prior hyperbolic…

Machine Learning · Computer Science 2026-02-06 Mohamad Dalal , Thomas B. Moeslund , Joakim Bruslund Haurum

The prevalence of tree-like structures, encompassing hierarchical structures and power law distributions, exists extensively in real-world applications, including recommendation systems, ecosystems, financial networks, social networks, etc.…

Machine Learning · Computer Science 2023-07-18 Menglin Yang , Min Zhou , Lujia Pan , Irwin King

Deep learning in hyperbolic space is quickly gaining traction in the fields of machine learning, multimedia, and computer vision. Deep networks commonly operate in Euclidean space, implicitly assuming that data lies on regular grids. Recent…

Machine Learning · Computer Science 2023-12-20 Max van Spengler , Philipp Wirth , Pascal Mettes

Hyperbolic-spaces are better suited to represent data with underlying hierarchical relationships, e.g., tree-like data. However, it is often necessary to incorporate, through alignment, different but related representations meaningfully.…

Machine Learning · Statistics 2020-12-03 Andrés Hoyos-Idrobo

Trajectory similarity is a cornerstone of trajectory data management and analysis. Traditional similarity functions often suffer from high computational complexity and a reliance on specific distance metrics, prompting a shift towards deep…

Databases · Computer Science 2025-04-16 Jianing Si , Haitao Yuan , Nan Jiang , Minxiao Chen , Xiao Ma , Shangguang Wang

With the tremendous success of deep learning in visual tasks, the representations extracted from intermediate layers of learned models, that is, deep features, attract much attention of researchers. Previous empirical analysis shows that…

Computer Vision and Pattern Recognition · Computer Science 2020-03-31 Qi Qian , Juhua Hu , Hao Li

Temporal link prediction, aiming to predict future edges between paired nodes in a dynamic graph, is of vital importance in diverse applications. However, existing methods are mainly built upon uniform Euclidean space, which has been found…

Machine Learning · Computer Science 2023-05-04 Qijie Bai , Changli Nie , Haiwei Zhang , Dongming Zhao , Xiaojie Yuan