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Related papers: TopoX: A Suite of Python Packages for Machine Lear…

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HyperNetX (HNX) is an open source Python library for the analysis and visualization of complex network data modeled as hypergraphs. Initially released in 2019, HNX facilitates exploratory data analysis of complex networks using algebraic…

Mathematical Software · Computer Science 2023-10-19 Brenda Praggastis , Sinan Aksoy , Dustin Arendt , Mark Bonicillo , Cliff Joslyn , Emilie Purvine , Madelyn Shapiro , Ji Young Yun

TopoDetect is a Python package that allows the user to investigate if important topological features, such as the Degree of the nodes, their Triangle Count, or their Local Clustering Score, are preserved in the embeddings of graph…

Machine Learning · Computer Science 2021-10-11 Maroun Haddad , Mohamed Bouguessa

TensorX is a Python library for prototyping, design, and deployment of complex neural network models in TensorFlow. A special emphasis is put on ease of use, performance, and API consistency. It aims to make available high-level components…

Machine Learning · Computer Science 2021-01-05 Davide Nunes , Luis Antunes

Real-world networks, with their evolving relations, are best captured as temporal graphs. However, existing software libraries are largely designed for static graphs where the dynamic nature of temporal graphs is ignored. Bridging this gap,…

Social and Information Networks · Computer Science 2024-02-07 Razieh Shirzadkhani , Shenyang Huang , Elahe Kooshafar , Reihaneh Rabbany , Farimah Poursafaei

In recent years, topology optimization (TO) has gained widespread attention as a powerful structural design method. However, its application remains challenging due to the deep expertise and extensive development effort required.…

Analysis of PDEs · Mathematics 2025-05-06 Liang He , Huayi Wei , Tian Tian

Distributed, large-scale quantum computing will need architectures that combine matter-based qubits with photonic links, but today's software stacks target either gate-based chips or linear-optical devices in isolation. We introduce Optyx,…

We introduce TopoNets, end-to-end probabilistic deep networks for modeling semantic maps with structure reflecting the topology of large-scale environments. TopoNets build a unified deep network spanning multiple levels of abstraction and…

Robotics · Computer Science 2020-03-12 Kaiyu Zheng , Andrzej Pronobis

Topological deep learning is a rapidly growing field that pertains to the development of deep learning models for data supported on topological domains such as simplicial complexes, cell complexes, and hypergraphs, which generalize many…

From social to biological systems, many real-world systems are characterized by higher-order, non-dyadic interactions. Such systems are conveniently described by hypergraphs, where hyperedges encode interactions among an arbitrary number of…

The article presents the torchosr package - a Python package compatible with PyTorch library - offering tools and methods dedicated to Open Set Recognition in Deep Neural Networks. The package offers two state-of-the-art methods in the…

Machine Learning · Computer Science 2024-02-12 Joanna Komorniczak , Pawel Ksieniewicz

As the field of data science continues to grow, there will be an ever-increasing demand for tools that make machine learning accessible to non-experts. In this paper, we introduce the concept of tree-based pipeline optimization for…

Neural and Evolutionary Computing · Computer Science 2016-03-22 Randal S. Olson , Nathan Bartley , Ryan J. Urbanowicz , Jason H. Moore

This paper describes a novel Python package, named causalgraph, for modeling and saving causal graphs embedded in knowledge graphs. The package has been designed to provide an interface between causal disciplines such as causal discovery…

Artificial Intelligence · Computer Science 2023-01-23 Sven Pieper , Carl Willy Mehling , Dominik Hirsch , Tobias Lüke , Steffen Ihlenfeldt

Tensors are higher-order extensions of matrices. While matrix methods form the cornerstone of machine learning and data analysis, tensor methods have been gaining increasing traction. However, software support for tensor operations is not…

Machine Learning · Computer Science 2018-05-10 Jean Kossaifi , Yannis Panagakis , Anima Anandkumar , Maja Pantic

Graph embeddings play a critical role in graph representation learning, allowing machine learning models to explore and interpret graph-structured data. However, existing methods often rely on opaque, high-dimensional embeddings, limiting…

Machine Learning · Computer Science 2025-11-26 Astrit Tola , Funmilola Mary Taiwo , Cuneyt Gurcan Akcora , Baris Coskunuzer

In recent years, significant advances have been made in exoplanet and brown dwarf observations. By using state-of-the-art models, astronomers can determine properties of their atmospheres, such as temperatures, the presence of clouds, or…

Instrumentation and Methods for Astrophysics · Physics 2025-10-27 Sam de Regt , Siddharth Gandhi , Louis Siebenaler , Darío González Picos

OSMnx is a Python package for downloading, modeling, analyzing, and visualizing urban networks and any other geospatial features from OpenStreetMap data. A large and growing body of literature uses it to conduct scientific studies across…

Physics and Society · Physics 2025-05-05 Geoff Boeing

High-quality quadrilateral mesh generation is a fundamental challenge in computer graphics. Traditional optimization-based methods are often constrained by the topological quality of input meshes and suffer from severe efficiency…

Graphics · Computer Science 2026-03-12 Yuguang Chen , Xinhai Liu , Xiangyu Zhu , Yiling Zhu , Zhuo Chen , Dongyu Zhang , Chunchao Guo

Topology applied to real world data using persistent homology has started to find applications within machine learning, including deep learning. We present a differentiable topology layer that computes persistent homology based on level set…

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