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This paper presents the implementation of a quantum sequence alignment (QSA) algorithm on biological data in environments simulating noisy intermediate-scale quantum (NISQ) computers. The approach to quantum bioinformatics adapts the…

Quantum Physics · Physics 2025-07-02 Floyd M. Creevey , Mingrui Jing , Lloyd C. L. Hollenberg

We present a theoretical study of transport properties through superconducting contacts based on a new formulation of boundary conditions that mimics interfaces for the quasiclassical theory of superconductivity. These boundary conditions…

Superconductivity · Physics 2009-11-07 J. C. Cuevas , M. Fogelstrom

Micro- and nanoresonators, which enable light trapping in small volumes for extended durations, play a crucial role in modern photonics. The optical response of these resonators is determined by their fundamental resonances, known as…

Optics · Physics 2024-08-27 Tong Wu , Philippe Lalanne

Discretizing spacetime is often a natural step towards modelling physical systems. For quantum systems, if we also demand a strict bound on the speed of information propagation, we get quantum cellular automata (QCAs). These originally…

Quantum Physics · Physics 2020-12-02 Terry Farrelly

This thesis contains a collection of articles exploring various aspects of quantum information processing with cavity quantum electrodynamics (QED), starting with qubit noise spectroscopy and building towards the longer-term goal of modular…

Quantum Physics · Physics 2025-05-09 Z. M. McIntyre

The diagrammatic approach is applied to study quasiparticle transport properties in two-dimensional d-wave superconductors with dilute nonmagnetic impurities both in Born and in unitary limits. It is found that a novel quantum interference…

Superconductivity · Physics 2009-11-07 Y. H. Yang , D. Y. Xing , M. Liu , Y. G. Wang

Quasi-simultaneous arrival (QSA) effects in secondary ion mass spectrometry can create mass-indepedent inaccuracies in isotope measurements when using electron multiplier detectors (EMs). The simple Poisson statistical model of QSA does not…

Instrumentation and Detectors · Physics 2021-02-24 Ryan Ogliore , Kazuhide Nagashima , Gary Huss , Pierre Haenecour

This paper introduces a new formalism for quantum cellular automata (QCAs), based on evolving tensor products of qubits using local unitary operators. It subsequently uses this formalism to analyze and validate several conjectures, stemming…

Quantum Physics · Physics 2019-10-03 Ruhi Shah , Jonathan Gorard

The relativistic precession model (RPM) is widely-considered as a benchmark framework to interpret quasi-periodic oscillations (QPOs), albeit several observational inconsistencies suggest that the model remains incomplete. The RPM ensures…

General Relativity and Quantum Cosmology · Physics 2025-12-16 Gabriele Bianchini , Orlando Luongo , Marco Muccino

Quantum subspace methods (QSMs) are a class of quantum computing algorithms where the time-independent Schrodinger equation for a quantum system is projected onto a subspace of the underlying Hilbert space. This projection transforms the…

Encoding models enable measurement of how our brains represent sensory inputs using electro-and magneto-encephalography (MEEG). Evaluating how closely encoding models reflect the underlying brain functions is a crucial premise for model…

Neurons and Cognition · Quantitative Biology 2026-04-17 Giovanni M. Di Liberto

We report a cluster of results regarding the difficulty of finding approximate ground states to typical instances of the quantum satisfiability problem $k$-QSAT on large random graphs. As an approximation strategy, we optimize the solution…

Statistical Mechanics · Physics 2013-06-27 B. Hsu , C. R. Laumann , A. Laeuchli , R. Moessner , S. L. Sondhi

The application of the quasi-steady-state approximation to the Michaelis-Menten reaction embedded in large open chemical reaction networks is a popular model reduction technique in deterministic and stochastic simulations of biochemical…

Statistical Mechanics · Physics 2013-05-28 Philipp Thomas , Arthur V. Straube , Ramon Grima

Electromagnetic stimulation of the human brain is a key tool for the neurophysiological characterization and diagnosis of several neurological disorders. Transcranial magnetic stimulation (TMS) is one procedure that is commonly used…

Machine Learning · Computer Science 2020-02-04 Essam A. Rashed , Jose Gomez-Tames , Akimasa Hirata

Accurate simulations of electric fields (E-fields) in neural stimulation depend on tissue conductivity representations that link underlying microscopic tissue structure with macroscopic assumptions. Mesoscale conductivity variations can…

The Quasi-harmonic Approximation (QHA) is a widely used method for calculating the temperature dependence of lattice parameters and the thermal expansion coefficients from first principles. However, applying QHA to anisotropic systems…

Materials Science · Physics 2025-03-13 Samare Rostami , Matteo Giantomassi , Xavier Gonze

Quasi-elastic neutron scattering (QENS) probes atomic and molecular motion on length and time scales central to catalysis, energy materials, and gas adsorption. However, conventional analytical fitting of QENS spectra often fails to…

Chemical Physics · Physics 2026-04-30 Harry Richardson , Kit McColl , Gøran Nilsen , Jeff Armstrong , Andrew R. McCluskey

Simulating a cellular automaton (CA) for t time-steps into the future requires t^2 serial computation steps or t parallel ones. However, certain CAs based on an Abelian group, such as addition mod 2, are termed ``linear'' because they obey…

adap-org · Physics 2009-10-30 Cristopher Moore

We study a coarse-graining procedure for quantum cellular automata on hypercubic lattices that consists in grouping neighboring cells into tiles and selecting a subspace within each tile. This is done in such a way that multiple evolution…

Quantum Physics · Physics 2025-06-04 Lorenzo Siro Trezzini , Alessandro Bisio , Paolo Perinotti

Higher-dimensional quantum systems (qudits) offer advantages in information encoding, error resilience, and compact gate implementations, and naturally arise in platforms such as superconducting and solid-state systems. However, realistic…

Quantum Physics · Physics 2025-06-17 Yule Mayevsky , Akram Youssry , Ritik Sareen , Gerardo A. Paz-Silva , Alberto Peruzzo