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Related papers: Retrosynthesis prediction enhanced by in-silico re…

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Computer-assisted methods have emerged as valuable tools for retrosynthesis analysis. However, quantifying the plausibility of generated retrosynthesis routes remains a challenging task. We introduce Retro-BLEU, a statistical metric adapted…

Machine Learning · Computer Science 2024-04-05 Junren Li , Lei Fang , Jian-Guang Lou

Retrosynthesis prediction is fundamental to drug discovery and chemical synthesis, requiring the identification of reactants that can produce a target molecule. Current template-free methods struggle to capture the structural invariance…

Machine Learning · Computer Science 2025-10-21 Jiaxi Zhuang , Yu Zhang , Aimin Zhou , Ying Qian

The problem of retrosynthetic planning can be framed as one player game, in which the chemist (or a computer program) works backwards from a molecular target to simpler starting materials though a series of choices regarding which reactions…

Machine Learning · Computer Science 2019-01-23 John S. Schreck , Connor W. Coley , Kyle J. M. Bishop

A central piece in enabling intelligent agentic behavior in foundation models is to make them capable of introspecting upon their behavior, reasoning, and correcting their mistakes as more computation or interaction is available. Even the…

Machine Learning · Computer Science 2024-07-29 Yuxiao Qu , Tianjun Zhang , Naman Garg , Aviral Kumar

Synthesis planning is the process of recursively decomposing target molecules into available precursors. Computer-aided retrosynthesis can potentially assist chemists in designing synthetic routes, but at present it is cumbersome and…

Chemical Physics · Physics 2019-07-04 Shuangjia Zheng , Jiahua Rao , Zhongyue Zhang , Jun Xu , Yuedong Yang

While modern Requirements Engineering (RE) heavily relies on natural language processing and Machine Learning (ML) techniques, their effectiveness is limited by the scarcity of high-quality datasets. This paper introduces Synthline, a…

Software Engineering · Computer Science 2025-05-07 Abdelkarim El-Hajjami , Camille Salinesi

Reinforcement learning has been shown to improve the performance of large language models. However, traditional approaches like RLHF or RLAIF treat the problem as single-step. As focus shifts toward more complex reasoning and agentic tasks,…

Artificial Intelligence · Computer Science 2025-04-29 Anna Goldie , Azalia Mirhoseini , Hao Zhou , Irene Cai , Christopher D. Manning

Machine learning (ML) offers a promising solution to pathloss prediction. However, its effectiveness can be degraded by the limited availability of data. To alleviate these challenges, this paper introduces a novel simulation-enhanced data…

While machine learning has transformed polymer design by enabling rapid property prediction and candidate generation, translating these designs into experimentally realizable materials remains a critical challenge. Traditionally, the…

Soft Condensed Matter · Physics 2025-12-08 Sakshi Agarwal , Wei Xiong , Rampi Ramprasad

Existing deep learning models applied to reaction prediction in organic chemistry can reach high levels of accuracy (> 90% for Natural Language Processing-based ones). With no chemical knowledge embedded than the information learnt from…

Machine Learning · Computer Science 2021-02-03 Alessandra Toniato , Philippe Schwaller , Antonio Cardinale , Joppe Geluykens , Teodoro Laino

Chemical reaction prediction is pivotal for accelerating drug discovery and synthesis planning. Despite advances in data-driven models, current approaches are hindered by an overemphasis on parameter and dataset scaling. Some methods…

Machine Learning · Computer Science 2026-03-04 Ran Li , Shimin Di , Haowei LI , Luanshi Bu , Jiachuan Wang , Wangze Ni , Lei Chen

A significant challenge in wet lab experiments with current drug design generative models is the trade-off between pharmacological properties and synthesizability. Molecules predicted to have highly desirable properties are often difficult…

Machine Learning · Computer Science 2025-04-04 Songtao Liu , Dandan Zhang , Zhengkai Tu , Hanjun Dai , Peng Liu

Motivation: Retrosynthesis planning poses a formidable challenge in the organic chemical industry. Single-step retrosynthesis prediction, a crucial step in the planning process, has witnessed a surge in interest in recent years due to…

Chemical Physics · Physics 2024-04-22 Kaipeng Zeng , Bo yang , Xin Zhao , Yu Zhang , Fan Nie , Xiaokang Yang , Yaohui Jin , Yanyan Xu

Capturing nonlinear relationships without sacrificing interpretability remains a persistent challenge in regression modeling. We introduce SplitWise, a novel framework that enhances stepwise regression. It adaptively transforms numeric…

Machine Learning · Computer Science 2026-02-06 Marcell T. Kurbucz , Nikolaos Tzivanakis , Nilufer Sari Aslam , Adam M. Sykulski

From medicines to materials, small organic molecules are indispensable for human well-being. To plan their syntheses, chemists employ a problem solving technique called retrosynthesis. In retrosynthesis, target molecules are recursively…

Artificial Intelligence · Computer Science 2018-04-17 Marwin H. S. Segler , Mike Preuss , Mark P. Waller

Self-awareness, i.e., the ability to assess and correct one's own generation, is a fundamental aspect of human intelligence, making its replication in large language models (LLMs) an important yet challenging task. Previous works tackle…

Machine Learning · Computer Science 2025-07-16 Hyunseok Lee , Seunghyuk Oh , Jaehyung Kim , Jinwoo Shin , Jihoon Tack

Synthetic training data has gained prominence in numerous learning tasks and scenarios, offering advantages such as dataset augmentation, generalization evaluation, and privacy preservation. Despite these benefits, the efficiency of…

Machine Learning · Computer Science 2024-03-21 Jianhao Yuan , Jie Zhang , Shuyang Sun , Philip Torr , Bo Zhao

One of the most reliable ways to create deployable models for specialized tasks is to obtain an adequate amount of high-quality task-specific data. However, for specialized tasks, often such datasets do not exist. Existing methods address…

Computation and Language · Computer Science 2024-07-09 Jiaxin Ge , Xueying Jia , Vijay Viswanathan , Hongyin Luo , Graham Neubig

Synthesis of advanced inorganic materials with minimum number of trials is of paramount importance towards the acceleration of inorganic materials development. The enormous complexity involved in existing multi-variable synthesis methods…

Materials Science · Physics 2020-11-02 Bijun Tang , Yuhao Lu , Jiadong Zhou , Han Wang , Prafful Golani , Manzhang Xu , Quan Xu , Cuntai Guan , Zheng Liu

Machine learning-assisted retrosynthesis prediction models have been gaining widespread adoption, though their performances oftentimes degrade significantly when deployed in real-world applications embracing out-of-distribution (OOD)…

Machine Learning · Computer Science 2023-12-19 Yemin Yu , Luotian Yuan , Ying Wei , Hanyu Gao , Xinhai Ye , Zhihua Wang , Fei Wu