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Graph mining is an important area in data mining and machine learning that involves extracting valuable information from graph-structured data. In recent years, significant progress has been made in this field through the development of…

Machine Learning · Computer Science 2024-12-30 Yuxin You , Zhen Liu , Xiangchao Wen , Yongtao Zhang , Wei Ai

Representation learning on text-attributed graphs (TAGs) has become a critical research problem in recent years. A typical example of a TAG is a paper citation graph, where the text of each paper serves as node attributes. Initial graph…

Machine Learning · Computer Science 2024-03-08 Xiaoxin He , Xavier Bresson , Thomas Laurent , Adam Perold , Yann LeCun , Bryan Hooi

Large Language Models (LLMs) have demonstrated strong capabilities in various natural language processing tasks; however, their application to graph-related problems remains limited, primarily due to scalability constraints and the absence…

Machine Learning · Computer Science 2025-05-08 Hyun Lee , Chris Yi , Maminur Islam , B. D. S. Aritra

Learning on Graphs has attracted immense attention due to its wide real-world applications. The most popular pipeline for learning on graphs with textual node attributes primarily relies on Graph Neural Networks (GNNs), and utilizes shallow…

Machine Learning · Computer Science 2024-01-17 Zhikai Chen , Haitao Mao , Hang Li , Wei Jin , Hongzhi Wen , Xiaochi Wei , Shuaiqiang Wang , Dawei Yin , Wenqi Fan , Hui Liu , Jiliang Tang

Large Language Models (LLMs) face significant limitations when applied to large-scale graphs, struggling with context constraints and inflexible reasoning. We present GraphChain, a framework that enables LLMs to analyze complex graphs…

Artificial Intelligence · Computer Science 2025-11-11 Chunyu Wei , Wenji Hu , Xingjia Hao , Xin Wang , Yifan Yang , Yueguo Chen , Yang Tian , Yunhai Wang

Time, cost, and energy efficiency are critical considerations in Deep-Learning (DL), particularly when processing long texts. Transformers, which represent the current state of the art, exhibit quadratic computational complexity relative to…

Computation and Language · Computer Science 2025-07-11 Fardin Rastakhiz

Despite recent advancements in domain adaptation techniques for large language models, these methods remain computationally intensive, and the resulting models can still exhibit hallucination issues. Most existing adaptation methods do not…

Computation and Language · Computer Science 2025-05-28 Bogdan Bogachov , Yaoyao Fiona Zhao

The use of large language models (LLMs) as feature enhancers to optimize node representations, which are then used as inputs for graph neural networks (GNNs), has shown significant potential in graph representation learning. However, the…

Machine Learning · Computer Science 2025-06-12 Hang Gao , Wenxuan Huang , Fengge Wu , Junsuo Zhao , Changwen Zheng , Huaping Liu

In this study, we investigate using graph neural network (GNN) representations to enhance contextualized representations of pre-trained language models (PLMs) for keyphrase extraction from lengthy documents. We show that augmenting a PLM…

Computation and Language · Computer Science 2023-05-17 Roberto Martínez-Cruz , Debanjan Mahata , Alvaro J. López-López , José Portela

Graph neural networks (GNNs) are vulnerable to adversarial attacks, especially for topology perturbations, and many methods that improve the robustness of GNNs have received considerable attention. Recently, we have witnessed the…

Machine Learning · Computer Science 2024-12-25 Zhongjian Zhang , Xiao Wang , Huichi Zhou , Yue Yu , Mengmei Zhang , Cheng Yang , Chuan Shi

Graphs are a powerful tool for representing and analyzing complex relationships in real-world applications such as social networks, recommender systems, and computational finance. Reasoning on graphs is essential for drawing inferences…

Machine Learning · Computer Science 2023-10-10 Bahare Fatemi , Jonathan Halcrow , Bryan Perozzi

Inspired by the recent advancements of Large Language Models (LLMs) in NLP tasks, there's growing interest in applying LLMs to graph-related tasks. This study delves into the capabilities of instruction-following LLMs for engaging with…

Computation and Language · Computer Science 2024-08-13 Kerui Zhu , Bo-Wei Huang , Bowen Jin , Yizhu Jiao , Ming Zhong , Kevin Chang , Shou-De Lin , Jiawei Han

Large language models (LLMs) have demonstrated immense potential across various tasks. However, research for exploring and improving the capabilities of LLMs in interpreting graph structures remains limited. To address this gap, we conduct…

Computation and Language · Computer Science 2025-02-17 Jie He , Yijun Yang , Wanqiu Long , Deyi Xiong , Victor Gutierrez-Basulto , Jeff Z. Pan

Fine-tuning large language models (LLMs) has become essential for adapting pretrained models to specific downstream tasks. In this paper, we propose Linear Chain Transformation (LinChain), a novel approach that introduces a sequence of…

Computation and Language · Computer Science 2024-11-04 Yulong Wang , Chang Zuo , Yin Xuan , Hong Li , Ni Wei

This paper studies learning on text-attributed graphs (TAGs), where each node is associated with a text description. An ideal solution for such a problem would be integrating both the text and graph structure information with large language…

Machine Learning · Computer Science 2023-03-02 Jianan Zhao , Meng Qu , Chaozhuo Li , Hao Yan , Qian Liu , Rui Li , Xing Xie , Jian Tang

Integrating Large Language Models (LLMs) with Knowledge Graphs (KGs) results in complex systems with numerous hyperparameters that directly affect performance. While such systems are increasingly common in retrieval-augmented generation,…

Artificial Intelligence · Computer Science 2025-06-02 Vasilije Markovic , Lazar Obradovic , Laszlo Hajdu , Jovan Pavlovic

Graph Neural Networks (GNNs) have been widely used in diverse brain network analysis tasks based on preprocessed functional magnetic resonance imaging (fMRI) data. However, their performances are constrained due to high feature sparsity and…

Machine Learning · Computer Science 2026-04-13 Rui Dong , Zitong Wang , Jiaxing Li , Weihuang Zheng , Youyong Kong

Knowledge graphs have emerged as a popular method for injecting up-to-date, factual knowledge into large language models (LLMs). This is typically achieved by converting the knowledge graph into text that the LLM can process in context.…

Computation and Language · Computer Science 2025-04-10 Elan Markowitz , Krupa Galiya , Greg Ver Steeg , Aram Galstyan

Graph Neural Networks (GNNs) are powerful tools for processing relational data but often struggle to generalize to unseen graphs, giving rise to the development of Graph Foundational Models (GFMs). However, current GFMs are challenged by…

Machine Learning · Computer Science 2026-05-25 Weishuo Ma , Yanbo Wang , Xiyuan Wang , Lei Zou , Muhan Zhang

Large language models (LLMs) are computationally intensive. The computation workload and the memory footprint grow quadratically with the dimension (layer width). Most of LLMs' parameters come from the linear layers of the transformer…

Machine Learning · Computer Science 2024-02-22 Xiao-Yang Liu , Jie Zhang , Guoxuan Wang , Weiqing Tong , Anwar Walid