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We propose a method for identifying an ectopic activation in the heart non-invasively. Ectopic activity in the heart can trigger deadly arrhythmias. The localization of the ectopic foci or earliest activation sites (EASs) is therefore a…

Signal Processing · Electrical Eng. & Systems 2022-03-15 Simone Pezzuto , Paris Perdikaris , Francisco Sahli Costabal

A method for beyond-mean-field calculations based on an energy density functional is described. The main idea is to map the energy surface for the nuclear quadrupole deformation, obtained from an energy density functional at the mean-field…

Nuclear Theory · Physics 2022-12-16 J. Ljungberg , J. Boström , B. G. Carlsson , A. Idini , J. Rotureau

The eikonal equation has become an indispensable tool for modeling cardiac electrical activation accurately and efficiently. In principle, by matching clinically recorded and eikonal-based electrocardiograms (ECGs), it is possible to build…

Optimization and Control · Mathematics 2023-12-06 Thomas Grandits , Jan Verhülsdonk , Gundolf Haase , Alexander Effland , Simone Pezzuto

Shape matching is a fundamental problem in computer graphics with many applications. Functional maps translate the point-wise shape-matching problem into its functional counterpart and have inspired numerous solutions over the last decade.…

Graphics · Computer Science 2023-05-18 Michele Colombo , Giacomo Boracchi , Simone Melzi

We prove the existence and the uniqueness of a solution for a modified bidomain model, describing the electrical behaviour of the cardiac tissue in pathological situations. The leading idea is to reduce the problem to an abstract parabolic…

Analysis of PDEs · Mathematics 2021-01-26 Micol Amar , Daniele Andreucci , Claudia Timofte

We discuss the computation of two-body matrix elements from the Argonne $v_{18}$ interaction. The matrix elements calculation is presented both in particle-particle and in particle-hole angular momentum coupling. The procedures developed…

Nuclear Theory · Physics 2007-05-23 Bogdan Mihaila , Jochen H. Heisenberg

Arrhythmias are potentially fatal disruptions to the normal heart rhythm, but their underlying dynamics is still poorly understood. Theoretical modeling is an important tool to fill this gap. Typical studies often employ detailed…

Tissues and Organs · Quantitative Biology 2022-03-08 R. V. Stenzinger , M. H. R. Tragtenberg

Most neuroimaging experiments are under-powered, limited by the number of subjects and cognitive processes that an individual study can investigate. Nonetheless, over decades of research, neuroscience has accumulated an extensive wealth of…

Neurons and Cognition · Quantitative Biology 2021-09-29 Gia H. Ngo , Minh Nguyen , Nancy F. Chen , Mert R. Sabuncu

Objective: The bidomain model and the finite element method are an established standard to mathematically describe cardiac electrophysiology, but are both suboptimal choices for fast and large-scale simulations due to high computational…

When an external field drives a colloidal system out of equilibrium, the ensuing colloidal response can be very complex and obtaining a detailed physical understanding often requires case-by-case considerations. In order to facilitate…

Soft Condensed Matter · Physics 2019-02-13 Daniel de las Heras , Johannes Renner , Matthias Schmidt

Probabilistic estimation of cardiac electrophysiological model parameters serves an important step towards model personalization and uncertain quantification. The expensive computation associated with these model simulations, however, makes…

While there have been many developments in computational probes of both strongly-correlated molecular systems and machine-learning accelerated molecular dynamics, there remains a significant gap in capabilities in simulating accurate…

Chemical Physics · Physics 2025-04-04 Yannic Rath , George H. Booth

A multilevel approach to sample the potential energy surface in a path integral formalism is proposed. The purpose is to reduce the required number of ab initio evaluations of energy and forces in ab initio path integral molecular dynamics…

Computational Physics · Physics 2014-12-22 Hua Y. Geng

We introduce a new procedure to construct weight factors, which flatten the probability density of the overlap with respect to some pre-defined reference configuration. This allows one to overcome free energy barriers in the overlap…

Statistical Mechanics · Physics 2009-11-10 B. A. Berg , H. Noguchi , Y. Okamoto

The bidomain system of degenerate reaction-diffusion equations is a well-established spatial model of electrical activity in cardiac tissue, with "reaction" linked to the cellular action potential and "diffusion" representing current flow…

Analysis of PDEs · Mathematics 2018-03-26 Mostafa Bendahmane , Kenneth H. Karlsen

We propose an integrated electromechanical model of the human heart, with focus on the left ventricle, wherein biophysically detailed models describe the different physical phenomena concurring to the cardiac function. We model the…

We propose a mathematical and numerical model for the simulation of the heart function that couples cardiac electrophysiology, active and passive mechanics and hemodynamics, and includes reduced models for cardiac valves and the circulatory…

Numerical Analysis · Mathematics 2022-08-12 Michele Bucelli , Alberto Zingaro , Pasquale Claudio Africa , Ivan Fumagalli , Luca Dede' , Alfio Quarteroni

We construct a folding potential between the $\alpha$ and $\Lambda$ particles based on underlying nucleon-nucleon and hyperon-nucleon interactions. Starting from a phenomenological $\Lambda$-N potential and a Gaussian form of the…

Nuclear Theory · Physics 2022-08-09 Htun Htun Oo , Hiroyuki Kamada

Contemporary realistic mathematical models of single-cell cardiac electrical excitation are immensely detailed. Model complexity leads to parameter uncertainty, high computational cost and barriers to mechanistic understanding. There is a…

Tissues and Organs · Quantitative Biology 2022-02-28 Muhamad H. N. Aziz , Radostin D. Simitev

Molecular dynamics (MD) simulations involving reactive potentials can be used to model material failure. The empirical potentials which are used in such simulations are able to adapt to the atomic environment, at the expense of a…

Materials Science · Physics 2016-05-25 Ignacio Tejada , Laurent Brochard , Tony Lelievre , Gabriel Stoltz , Frederic Legoll , Eric Cances