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The extraction of labels from radiology text reports enables large-scale training of medical imaging models. Existing approaches to report labeling typically rely either on sophisticated feature engineering based on medical domain knowledge…

Computation and Language · Computer Science 2020-10-20 Akshay Smit , Saahil Jain , Pranav Rajpurkar , Anuj Pareek , Andrew Y. Ng , Matthew P. Lungren

This study aimed to develop an algorithm to automatically extract annotations for chest X-ray classification models from German thoracic radiology reports. An automatic label extraction model was designed based on the CheXpert architecture,…

Computation and Language · Computer Science 2023-06-06 Alessandro Wollek , Sardi Hyska , Thomas Sedlmeyr , Philip Haitzer , Johannes Rueckel , Bastian O. Sabel , Michael Ingrisch , Tobias Lasser

Radiologists are in short supply globally, and deep learning models offer a promising solution to address this shortage as part of clinical decision-support systems. However, training such models often requires expensive and time-consuming…

Computation and Language · Computer Science 2023-07-10 Alessandro Wollek , Philip Haitzer , Thomas Sedlmeyr , Sardi Hyska , Johannes Rueckel , Bastian Sabel , Michael Ingrisch , Tobias Lasser

It is often infeasible or impossible to obtain ground truth labels for medical data. To circumvent this, one may build rule-based or other expert-knowledge driven labelers to ingest data and yield silver labels absent any ground-truth…

Machine Learning · Computer Science 2020-06-30 Matthew B. A. McDermott , Tzu Ming Harry Hsu , Wei-Hung Weng , Marzyeh Ghassemi , Peter Szolovits

Although deep learning models for chest X-ray interpretation are commonly trained on labels generated by automatic radiology report labelers, the impact of improvements in report labeling on the performance of chest X-ray classification…

Image and Video Processing · Electrical Eng. & Systems 2021-11-30 Saahil Jain , Akshay Smit , Andrew Y. Ng , Pranav Rajpurkar

Large, labeled datasets have driven deep learning methods to achieve expert-level performance on a variety of medical imaging tasks. We present CheXpert, a large dataset that contains 224,316 chest radiographs of 65,240 patients. We design…

Chest X-ray report generation and automated evaluation are limited by poor recognition of low-prevalence abnormalities and inadequate handling of clinically important language, including negation and ambiguity. We develop a clinician-guided…

The increasing availability of unstructured clinical narratives in electronic health records (EHRs) has created new opportunities for automated disease characterization, cohort identification, and clinical decision support. However,…

Computation and Language · Computer Science 2026-03-03 Fariba Afrin Irany , Sampson Akwafuo

The rapid expansion of electronic health record (EHR) systems has generated large volumes of unstructured clinical narratives that contain valuable information for disease identification, patient cohort discovery, and clinical decision…

Computation and Language · Computer Science 2026-03-17 Fariba Afrin Irany , Sampson Akwafuo

Automatic extraction of medical conditions from free-text radiology reports is critical for supervising computer vision models to interpret medical images. In this work, we show that radiologists labeling reports significantly disagree with…

Image and Video Processing · Electrical Eng. & Systems 2021-03-16 Saahil Jain , Akshay Smit , Steven QH Truong , Chanh DT Nguyen , Minh-Thanh Huynh , Mudit Jain , Victoria A. Young , Andrew Y. Ng , Matthew P. Lungren , Pranav Rajpurkar

Introduction: With the rapid advances in large language models (LLMs), there have been numerous new open source as well as commercial models. While recent publications have explored GPT-4 in its application to extracting information of…

In chest X-ray (CXR) image analysis, rule-based systems are usually employed to extract labels from reports for dataset releases. However, there is still room for improvement in label quality. These labelers typically output only presence…

Image and Video Processing · Electrical Eng. & Systems 2025-06-03 Ricardo Bigolin Lanfredi , Pritam Mukherjee , Ronald Summers

In the field of medical image analysis, the scarcity of Chinese chest X-ray report datasets has hindered the development of technology for generating Chinese chest X-ray reports. On one hand, the construction of a Chinese chest X-ray report…

Machine Learning · Computer Science 2024-04-29 Mengwei Wang , Ruixin Yan , Zeyi Hou , Ning Lang , Xiuzhuang Zhou

Decision support tools that rely on supervised learning require large amounts of expert annotations. Using past radiological reports obtained from hospital archiving systems has many advantages as training data above manual single-class…

Machine Learning · Computer Science 2021-05-21 Aydan Gasimova

The latest breakthroughs in large vision-language models, such as Bard and GPT-4, have showcased extraordinary abilities in performing a wide range of tasks. Such models are trained on massive datasets comprising billions of public…

Computer Vision and Pattern Recognition · Computer Science 2025-05-08 Omkar Thawakar , Abdelrahman Shaker , Sahal Shaji Mullappilly , Hisham Cholakkal , Rao Muhammad Anwer , Salman Khan , Jorma Laaksonen , Fahad Shahbaz Khan

Automated labeling of chest X-ray reports is essential for enabling downstream tasks such as training image-based diagnostic models, population health studies, and clinical decision support. However, the high variability, complexity, and…

Computation and Language · Computer Science 2025-05-06 Brian Wong , Kaito Tanaka

Radiologists play a crucial role in translating medical images into actionable reports. However, the field faces staffing shortages and increasing workloads. While automated approaches using vision-language models (VLMs) show promise as…

The large language model called ChatGPT has drawn extensively attention because of its human-like expression and reasoning abilities. In this study, we investigate the feasibility of using ChatGPT in experiments on using ChatGPT to…

Computation and Language · Computer Science 2024-10-22 Qing Lyu , Josh Tan , Michael E. Zapadka , Janardhana Ponnatapura , Chuang Niu , Kyle J. Myers , Ge Wang , Christopher T. Whitlow

Medical imaging is crucial for diagnosing, monitoring, and treating medical conditions. The medical reports of radiology images are the primary medium through which medical professionals attest their findings, but their writing is time…

Computation and Language · Computer Science 2025-01-07 Iustin Sîrbu , Iulia-Renata Sîrbu , Jasmina Bogojeska , Traian Rebedea

The automation of chest X-ray reporting has garnered significant interest due to the time-consuming nature of the task. However, the clinical accuracy of free-text reports has proven challenging to quantify using natural language processing…

Computer Vision and Pattern Recognition · Computer Science 2023-05-03 Matthias Keicher , Kamilia Zaripova , Tobias Czempiel , Kristina Mach , Ashkan Khakzar , Nassir Navab
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