Related papers: Isomorphism Testing of Rooted Trees in Linear Time
We identify the complexity of the classification problem for automorphisms of a given countable regularly branching tree up to conjugacy. We consider both the rooted and unrooted cases. Additionally, we calculate the complexity of the…
It is confirmed in this work that the graph isomorphism can be tested in polynomial time, which resolves a longstanding problem in the theory of computation. The contributions are in three phases as follows. 1. A description graph…
We study homomorphism polynomials, which are polynomials that enumerate all homomorphisms from a pattern graph $H$ to $n$-vertex graphs. These polynomials have received a lot of attention recently for their crucial role in several new…
Automatic structures are finitely presented structures where the universe and all relations can be recognized by finite automata. It is known that the isomorphism problem for automatic structures is complete for $\Sigma^1_1$; the first…
Temporal graphs are graphs where the topology and/or other properties of the graph change with time. They have been used to model applications with temporal information in various domains. Problems on static graphs become more challenging…
We provide time- and sample-efficient algorithms for learning and testing latent-tree Ising models, i.e. Ising models that may only be observed at their leaf nodes. On the learning side, we obtain efficient algorithms for learning a…
Two kinds of approximation algorithms exist for the k-BALANCED PARTITIONING problem: those that are fast but compute unsatisfying approximation ratios, and those that guarantee high quality ratios but are slow. In this paper we prove that…
The complexity of the graph isomorphism problem for trapezoid graphs has been open over a decade. This paper shows that the problem is GI-complete. More precisely, we show that the graph isomorphism problem is GI-complete for comparability…
We consider the NP-hard Tree Containment problem that has important applications in phylogenetics. The problem asks if a given leaf-labeled network contains a subdivision of a given leaf-labeled tree. We develop a fast algorithm for the…
We introduce a new notation for representing labeled regular bipartite graphs of arbitrary degree. Several enumeration problems for labeled and unlabeled regular bipartite graphs have been introduced. A general algorithm for enumerating all…
Deciding whether there is a single tree -a supertree- that summarizes the evolutionary information in a collection of unrooted trees is a fundamental problem in phylogenetics. We consider two versions of this question: agreement and…
In this paper, we relate a beautiful theory by Lov\'asz with a popular heuristic algorithm for the graph isomorphism problem, namely the color refinement algorithm and its k-dimensional generalization known as the Weisfeiler-Leman…
By a map we mean a $2$-cell decomposition of a closed compact surface, i.e., an embedding of a graph such that every face is homeomorphic to an open disc. Automorphism of a map can be thought of as a permutation of the vertices which…
We develop the methodology of positioning graph vertices relative to each other to solve the problem of determining isomorphism of two undirected graphs. Based on the position of the vertex in one of the graphs, it is determined the…
Frequent pattern mining is a relevant method to analyse structured data, like sequences, trees or graphs. It consists in identifying characteristic substructures of a dataset. This paper deals with a new type of patterns for tree data:…
Tree Containment is a fundamental problem in phylogenetics useful for verifying a proposed phylogenetic network, representing the evolutionary history of certain species. Tree Containment asks whether the given phylogenetic tree (for…
Approximating the roots of a holomorphic function in an input box is a fundamental problem in many domains. Most algorithms in the literature for solving this problem are conditional, i.e., they make some simplifying assumptions, such as,…
Graphs are widely used to model complicated data semantics in many application domains. In this paper, two novel and efficient algorithms Fast-ON and Fast-P are proposed for solving the subgraph isomorphism problem. The two algorithms are…
Many computational problems admit fast algorithms on special inputs, however, the required properties might be quite restrictive. E.g., many graph problems can be solved much faster on interval or cographs, or on graphs of small…
Graph Isomorphism is the prime example of a computational problem with a wide difference between the best known lower and upper bounds on its complexity. We bridge this gap for a natural and important special case, planar graph isomorphism,…