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Compiled data for the stem cell numbers, Ns, and division rates, ms, is reanalized in order to show that we can distinguish two groups of human tissues. In the first one, there is a relatively high fraction of maintenance (stem and transit)…

Tissues and Organs · Quantitative Biology 2020-08-12 Augusto Gonzalez , Teresita Rodriguez , Rolando Perez

Recent observations demonstrate that densely packed tissues exhibit features of glassy dynamics, such as caging behavior and dynamical heterogeneities, although it has remained unclear how single-cell properties control this behavior. Here…

Soft Condensed Matter · Physics 2014-02-19 Dapeng Bi , J. H. Lopez , J. M. Schwarz , M. Lisa Manning

The flow of the laminar boundary layer on a flat plate is studied with simulation of Navier-Stokes equations. The mechanisms of flow instability at external edge of the boundary layer and near the wall are analyzed using the energy gradient…

Fluid Dynamics · Physics 2018-06-20 Hua-Shu Dou , Wenqian Xu , Boo Cheong Khoo

During embryonic morphogenesis, tissues undergo dramatic deformations in order to form functional organs. Similarly, in adult animals, living cells and tissues are continually subjected to forces and deformations. Therefore, the success of…

Soft Condensed Matter · Physics 2024-05-06 Michael J. Hertaeg , Suzanne M. Fielding , Dapeng Bi

We investigate the tumor boundary instability induced by nutrient consumption and supply based on a Hele-Shaw model derived from taking the incompressible limit of a cell density model. We analyze the boundary stability/instability in two…

Analysis of PDEs · Mathematics 2023-05-17 Yu Feng , Min Tang , Xiaoqian Xu , Zhennan Zhou

During morphogenesis, the shape of a tissue emerges from collective cellular behaviors, which are in part regulated by mechanical and biochemical interactions between cells. Quantification of force and stress is therefore necessary to…

Tissues and Organs · Quantitative Biology 2014-02-19 K. Sugimura , Y. Bellaïche , F. Graner , P. Marcq , S. Ishihara

We consider a moving boundary mathematical model of biological invasion. The model describes the spatiotemporal evolution of two adjacent populations: each population undergoes linear diffusion and logistic growth, and the boundary between…

Populations and Evolution · Quantitative Biology 2023-09-06 Matthew J Simpson , Nizhum Rahman , Scott W McCue , Alexander KY Tam

Biological cells can actively tune their intracellular architecture according to their overall shape. Here we explore the rheological implication of such coupling in a minimal model of a dense cellular material where each cell exerts an…

Soft Condensed Matter · Physics 2022-04-13 Shao-Zhen Lin , Matthias Merkel , Jean-François Rupprecht

Homeostasis of protein concentrations in cells is crucial for their proper functioning, and this requires concentrations (at their steady-state levels) to be stable to fluctuations. Since gene expression is regulated by proteins such as…

Biological Physics · Physics 2020-11-10 Yipei Guo , Ariel Amir

In this paper, we investigate the tumor instability by employing both analytical and numerical techniques to validate previous results and extend the analytical findings presented in a prior study by Feng et al 2023. Building upon the…

Analysis of PDEs · Mathematics 2024-01-11 Jian-Guo Liu , Thomas Witelski , Xiaoqian Xu , Jiaqi Zhang

The stability and transition in the bottom boundary layer under a solitary wave are analysed in the presence of finite amplitude disturbances. First, the receptivity of the boundary layer is investigated using a linear input-output…

Fluid Dynamics · Physics 2020-07-15 Asim Önder , Philip Li-Fan Liu

The traditional approach in the study of hydrodynamic stability of stratified fluids includes the stick boundary conditions between layers. However, this rule may be violated in polymer systems and as a consequence various instabilities may…

Fluid Dynamics · Physics 2015-06-10 Stanislav Patlazhan

In mean-field theory, i.e. infinite-range interactions, the transition between metastable and unstable states of a thermodynamic system is sharp. The metastable and the unstable states are separated by a spinodal curve. For systems with…

Statistical Mechanics · Physics 2009-11-07 Dieter W. Heermann , Claudette E. Cordeiro

The rheology of biological tissues is important for their function, and we would like to better understand how single cells control global tissue properties such as tissue fluidity. A confluent tissue can fluidize when cells diffuse by…

Soft Condensed Matter · Physics 2019-05-31 Preeti Sahu , Janice Kang , Gonca Erdemci-Tandogan , M. Lisa Manning

A procedure that allows study of unstable stability of a boundary layer between plasma and a magnetic field has been developed. Layer equilibrium for one reason or another is not set but follows from strict solution of kinetic equation with…

Plasma Physics · Physics 2010-05-25 V. V. Lyahov , V. M. Neshchadim

We use numerical simulations to study the dynamics of dense assemblies of self-propelled particles in the limit of extremely large, but finite, persistence times. In this limit, the system evolves intermittently between mechanical…

Soft Condensed Matter · Physics 2023-06-09 Yann-Edwin Keta , Rituparno Mandal , Peter Sollich , Robert L. Jack , Ludovic Berthier

An analysis of instability dynamics in a stochastic magnetic field is presented for the tractable case of the resistive interchange. Externally prescribed static magnetic perturbations convert the eigenmode problem to a stochastic…

Plasma Physics · Physics 2023-06-14 Mingyun Cao , P. H. Diamond

A hallmark of biological tissues, viewed as complex cellular materials, is the active generation of mechanical stresses by cellular processes, such as cell divisions. Each cellular event generates a force dipole that deforms the surrounding…

We study the emergence of cell differentiation under the assumption of the existence of a given number of tradeoffs between genes encoding different functions. In the model the viability of colonies is determined by the capability of their…

Populations and Evolution · Quantitative Biology 2017-06-06 André Amado , Paulo R. A. Campos

Living cells respond to mechanical changes in the matrix surrounding them by applying contractile forces that are in turn transmitted to distant cells. We calculate the mechanical work that each cell performs in order to deform the matrix,…

Soft Condensed Matter · Physics 2021-08-17 Chaviva Sirote , Yair Shokef