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In this paper, we propose DEXTER, an end to end system to extract information from tables present in medical health documents, such as electronic health records (EHR) and explanation of benefits (EOB). DEXTER consists of four sub-system…
Joint entity and relation extraction is an essential task in natural language processing and knowledge graph construction. Existing approaches usually decompose the joint extraction task into several basic modules or processing steps to…
Usually, entity relation recognition systems either use a pipe-lined model that treats the entity tagging and relation identification as separate tasks or a joint model that simultaneously identifies the relation and entities. This paper…
We introduce KPI-EDGAR, a novel dataset for Joint Named Entity Recognition and Relation Extraction building on financial reports uploaded to the Electronic Data Gathering, Analysis, and Retrieval (EDGAR) system, where the main objective is…
We target on the document-level relation extraction in an end-to-end setting, where the model needs to jointly perform mention extraction, coreference resolution (COREF) and relation extraction (RE) at once, and gets evaluated in an…
Joint Multimodal Entity-Relation Extraction (JMERE) is a challenging task that aims to extract entities and their relations from text-image pairs in social media posts. Existing methods for JMERE require large amounts of labeled data.…
Electronic health records (EHRs) form an invaluable resource for training clinical decision support systems. To leverage the potential of such systems in high-risk applications, we need large, structured tabular datasets on which we can…
We propose a unified cross-domain transfer learning framework that leverages knowledge from multiple heterogeneous medical imaging datasets to improve performance across segmentation, classification, and object detection tasks. Our approach…
We introduce SpERT, an attention model for span-based joint entity and relation extraction. Our key contribution is a light-weight reasoning on BERT embeddings, which features entity recognition and filtering, as well as relation…
The integration of multimodal Electronic Health Records (EHR) data has significantly advanced clinical predictive capabilities. Existing models, which utilize clinical notes and multivariate time-series EHR data, often fall short of…
Multimodal named entity recognition (MNER) and multimodal relation extraction (MRE) are two fundamental subtasks in the multimodal knowledge graph construction task. However, the existing methods usually handle two tasks independently,…
Distributed representations of medical concepts have been used to support downstream clinical tasks recently. Electronic Health Records (EHR) capture different aspects of patients' hospital encounters and serve as a rich source for…
This paper proposes a structure-aware decoding method based on large language models to address the difficulty of traditional approaches in maintaining both semantic integrity and structural consistency in nested and overlapping entity…
The research explores the utilization of a deep learning model employing an attention mechanism in medical text mining. It targets the challenge of analyzing unstructured text information within medical data. This research seeks to enhance…
A significant portion of the data available today is found within tables. Therefore, it is necessary to use automated table extraction to obtain thorough results when data-mining. Today's popular state-of-the-art methods for table…
Document-level relation extraction faces two overlooked challenges: long-tail problem and multi-label problem. Previous work focuses mainly on obtaining better contextual representations for entity pairs, hardly address the above…
In coreference resolution, it is important to consider all members of a coreference cluster and decide about all of them at once. This technique can help to avoid losing precision and also in finding long-distance relations. The presented…
We introduce a hybrid human-automated system that provides scalable entity-risk relation extractions across large data sets. Given an expert-defined keyword taxonomy, entities, and data sources, the system returns text extractions based on…
Decentralized collaborative learning under data heterogeneity and privacy constraints has rapidly advanced. However, existing solutions like federated learning, ensembles, and transfer learning, often fail to adequately serve the unique…
Few-shot Continual Relations Extraction (FCRE) is an emerging and dynamic area of study where models can sequentially integrate knowledge from new relations with limited labeled data while circumventing catastrophic forgetting and…